Genomic Location: not available for this species
NR annotation: CAB4032161.1, Hypothetical predicted protein, partial [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB4032161.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q8K1N4 | Spermatogenesis-associated serine-rich protein 2 OS=Mus musculus OX=10090 GN=Spats2 PE=1 SV=1 |
| Q86XZ4 | Spermatogenesis-associated serine-rich protein 2 OS=Homo sapiens OX=9606 GN=SPATS2 PE=1 SV=1 |
| Q9NUQ6 | SPATS2-like protein OS=Homo sapiens OX=9606 GN=SPATS2L PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0008125 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF07139 all species → | SPATS2-like | Spermatogenesis-associated serine-rich protein 2-like | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR009816 all species → | Family | SPATS2-like | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR15623 all species → | SPERMATOGENESIS-ASSOCIATED SERINE-RICH PROTEIN 2-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
CAB4032161.1.Transcript abundance of CAB4032161.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
