Genomic Location: not available for this species
NR annotation: CAB4033089.1, Hypothetical predicted protein [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB4033089.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| A0A1D3PCM3 | Serine O-succinyltransferase OS=Emericella nidulans OX=162425 GN=CysA PE=1 SV=1 |
| Q5AT15 | Serine O-succinyltransferase OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=cysA PE=1 SV=1 |
| Q10341 | Serine O-succinyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cys2 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0004743 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00561 all species → | Abhydrolase_1 | alpha/beta hydrolase fold | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000073 all species → | Domain | Alpha/beta hydrolase fold-1 | Interproscan |
| IPR029058 all species → | Homologous_superfamily | Alpha/Beta hydrolase fold | Interproscan |
| IPR008220 all species → | Family | Homoserine/serine acetyltransferase MetX-like | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR32268 all species → | HOMOSERINE O-ACETYLTRANSFERASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0004414 all species → | Molecular Function | homoserine O-acetyltransferase activity | Interproscan |
| GO:0005739 all species → | Cellular Component | mitochondrion | Interproscan |
| GO:0006535 all species → | Biological Process | cysteine biosynthetic process from serine | Interproscan |
| GO:0009001 all species → | Molecular Function | serine O-acetyltransferase activity | Interproscan |
| GO:0009058 all species → | Biological Process | biosynthetic process | Interproscan |
| GO:0009086 all species → | Biological Process | methionine biosynthetic process | Interproscan |
| GO:0009092 all species → | Biological Process | homoserine metabolic process | Interproscan |
| GO:0016747 all species → | Molecular Function | acyltransferase activity, transferring groups other than amino-acyl groups | Interproscan |
CAB4033089.1.Transcript abundance of CAB4033089.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
