Genomic Location: not available for this species
NR annotation: CAB4033658.1, 2-aminoethylphosphonate--pyruvate transaminase [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB4033658.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q64PZ3 | 2-aminoethylphosphonate--pyruvate transaminase OS=Bacteroides fragilis (strain YCH46) OX=295405 GN=phnW PE=3 SV=1 |
| Q5L9Q0 | 2-aminoethylphosphonate--pyruvate transaminase OS=Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / CCUG 4856 / JCM 11019 / LMG 10263 / NCTC 9343 / Onslow / VPI 2553 / EN-2) OX=272559 GN=phnW PE=3 SV=1 |
| A6L4N0 | 2-aminoethylphosphonate--pyruvate transaminase OS=Phocaeicola vulgatus (strain ATCC 8482 / DSM 1447 / JCM 5826 / CCUG 4940 / NBRC 14291 / NCTC 11154) OX=435590 GN=phnW PE=3 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0003226 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00266 all species → | Aminotran_5 | Aminotransferase class-V | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR012703 all species → | Family | 2-aminoethylphosphonate--pyruvate transaminase | Interproscan |
| IPR000192 all species → | Domain | Aminotransferase class V domain | Interproscan |
| IPR015421 all species → | Homologous_superfamily | Pyridoxal phosphate-dependent transferase, major domain | Interproscan |
| IPR015422 all species → | Homologous_superfamily | Pyridoxal phosphate-dependent transferase, small domain | Interproscan |
| IPR015424 all species → | Homologous_superfamily | Pyridoxal phosphate-dependent transferase | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR42778 all species → | 2-AMINOETHYLPHOSPHONATE--PYRUVATE TRANSAMINASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0019700 all species → | Biological Process | organic phosphonate catabolic process | Interproscan |
| GO:0047304 all species → | Molecular Function | 2-aminoethylphosphonate-pyruvate transaminase activity | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K03430 | phnW; 2-aminoethylphosphonate-pyruvate transaminase | EC:2.6.1.37 | Amino acid related enzymes | ko01007 | deepkoala |
Transcript abundance of CAB4033658.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
