Gene detail

Detailed information of CAB4034578.1 in Paramuricea clavata

Genomic Location: pcla8_s022390:6523...8746
NR annotation: CAB4034578.1, Hypothetical predicted protein [Paramuricea clavata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-PACLA_8A067077

CTTTCTAAGGAAGGTGATTGATATATTAGAGTCCTGATCTCACTCTTATATCATGATTGAGTCTGTCTTGCTAACATCAAACAATTTTACTCCTGAAAATGTAAGAGTTAATGGGTTAATCCATATGTATGTGATATTTTAGATAACTGGTTTATTCAAAGGAATGGCCTCACCGTTAGCCGGTCAAGCATTCATCAATGGGTGTGTATTTGGTGTTTACAGCGAATCCTATCGTCGTCTACAAAACGTACCATACACTGTATTTTGGGCTGGCTGTGTTGCTGGTGTAGCACAGGGGCTTATCACCGCCCCTCTGGAACTAGCTAAGGTCCGGTTACAAGTACAAGGTGAGGGGGCGGACCCTAGGAAAATGACAATTGCCGAGAGGAAAAAACTTAGATACACTGGCTCAATTGATTGCATGTGGAAAGTTTTTAGAACTGAAGGTTTAAGGGGAATATCGAAAGGCATGTGTGTTACTTTAGTCCGTGAAATTCCTGCAACCGGTGTGTACTTTTATTCCTATGATGAACTATGTAAACTTGGGCCTAGGTCCGAGACTAGGAACGAGGCGATGCCAGTGACTGTCCTCATCGCTGGCGGGATTGCCGGGATCCTGTCTTGGATAGCCACTTACCCTTGTGACGTGATAAAGTCCAGGTTTCAAGCAGATTTAGACGGTATATACACAAGTAGTACAGATTGTGCGATAAAGAGTTATCGGGCCGAAGGATGGCGTATGTTTTTCCAAGGCATGAATTCGACAATCATTCGGGCCTTTCCGACTAATGCTGCGACTTTTGGAGCTGTTGTATTATTTGCAAGACTTGTGTATGGGGAAGACAATGATATGTGGTAACTCATGGAAAGCCAGTGTAGTTAggttttaaaattctttttacCTTTTTCGAGGGTGGTAAAGGGGGGTTTGGATCATGTTTCACGTGAAGAAAAACCGCCATTTCGCGTTTCACATCACTGTAGAAAATTACTAACTATTTCACGAAAATTGACAAAACGTACACGTTTCTAACATGTTTCTAACTAAAAAACCAACCATTACGTCTACAAGTGGGCCGGAACGCACAAGTTATAACAAACCCGCAGCAGATGTGTAGCAATTATGctcttccaacaacttgttacagGATGTGTTCTcgctgcttgttcccagcttgttgacaatttgctacaaggttgttgagctcaacggACTCGTTACcgagttgttccaacaacttgttatcgtcctgcaaatcaacaatttgtcaacacgttgtgagtgacaatcttgtagcaactaAAAATAACAGAATCGTTACAACTTGTGAGCAAGCTTGCTACACATTTTGTATAAATGTTGACAGGTTGTGAGATTTTTAACGTGCGTAGTAGAAATCAAGAACTGAAATACatggatttttttttttggggggggagaagaaagagaaaaacaaaatgggaatacaagaaaaaaaaatcaagaaaatacaTGGATGTCAGAGTTAGGGTTAGGCTGCACTCGGTATCTCACTATAGAACTGTAAAAAGGTTTGTGAATTTTATAATACATTTATTCGACCTAAccggagcagttgcgaaaaatgcaacaataGGCACTCTGNNNNNNNNNNNNNNNNNNNNgggggggggggtgatacacccccacaccccccgGGTGGCACGGCCCTGCTGCTAGGTATGTAAATCACGTTTCACGACACAAAAATCCGTCATTAATTTCACGAGAACAAAGGCAACAAACTGACTGGcaattcacggctcacgaaaataccctttacCACCCtctttgaataatatttaataaatgatATTGAACACGAGACGACAGCCGAgtgttttatgtctgataaagcacggactgcgattgttttaaatggcttaaaaaacgacccatcttatgagttcattggcgaagtaattttaaaaatcaacgttgtctGTAAGCCGAGAAAGTCAAAGCTTATCATgtataaaaccaccgacacggtAGTGATTCCTCAGTTGTCGTTTTCTTATGAATTACGTATTACtactaaaattattttttactgCTTGTCACATATAGTGTCACACATTATGACTTTATGCAAATATGAAAATAACAAATTACAtgcttaaagcctggttcacatatgcctgcgactgtatcattatgcctctacttgccgccgaaataccggcaaagttgagctcaagtcaa

Protein

Uniprot

Uniprot term	Description
Q5HZE0	Mitochondrial basic amino acids transporter OS=Rattus norvegicus OX=10116 GN=Slc25a29 PE=2 SV=1
Q8BL03	Mitochondrial basic amino acids transporter OS=Mus musculus OX=10090 GN=Slc25a29 PE=1 SV=1
Q8N8R3	Mitochondrial basic amino acids transporter OS=Homo sapiens OX=9606 GN=SLC25A29 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00153	Mito_carr	Mitochondrial carrier protein	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018108	Repeat	Mitochondrial substrate/solute carrier	Interproscan
IPR023395	Homologous_superfamily	Mitochondrial carrier domain superfamily	Interproscan
IPR050567	Family	Mitochondrial Carrier	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45624	MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005289	Molecular Function	high-affinity L-arginine transmembrane transporter activity	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0006810	Biological Process	transport	Interproscan
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:1990575	Biological Process	mitochondrial L-ornithine transmembrane transport	Interproscan