Detailed information of CAB4035296.1 in Paramuricea clavata

Genomic Location: pcla8_s023273:7692...8366
NR annotation: CAB4035296.1, HGH1 homolog [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6DGR4Protein HGH1 homolog OS=Danio rerio OX=7955 GN=hgh1 PE=2 SV=1
Q3KQ45Protein HGH1 homolog OS=Xenopus laevis OX=8355 GN=hgh1 PE=2 SV=1
Q66KK3Protein HGH1 homolog OS=Xenopus tropicalis OX=8364 GN=hgh1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007478 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04063
all species →
DUF383Domain of unknown function (DUF383)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016024
all species →
Homologous_superfamilyArmadillo-type foldInterproscan
IPR039717
all species →
FamilyProtein Hgh1Interproscan
IPR007205
all species →
DomainProtein HGH1 N-terminalInterproscan
IPR011989
all species →
Homologous_superfamilyArmadillo-like helicalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13387
all species →
PROTEIN HGH1 HOMOLOGInterproscan

 Gene Ontology
No Gene Ontology signature was detected for CAB4035296.1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for CAB4035296.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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