Genomic Location: not available for this species
NR annotation: CAB4035399.1, BTB POZ domain-containing KCTD9 [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB4035399.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0061609 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00805 all species → | Pentapeptide | Pentapeptide repeats (8 copies) | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR051082 all species → | Family | Pentapeptide repeat and BTB/POZ domain-containing protein | Interproscan |
| IPR001646 all species → | Repeat | Pentapeptide repeat | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR14136 all species → | UNCHARACTERIZED | Interproscan |
CAB4035399.1 in Paramuricea clavata.CAB4035399.1.Transcript abundance of CAB4035399.1 across 21 RNA-seq samples of Paramuricea clavata. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 4 | 32.50 | 77.81 | |
| apical branchlet · Temperature treatment at T0 | 6 | 3 | 17.11 | 64.16 | |
| apical branchlet · Temperature treatment at T25 | 5 | 3 | 29.98 | 68.84 | |
| apical branchlet · Control at T0 | 4 | 1 | 5.94 | 23.76 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
