Detailed information of CAB4035994.1 in Paramuricea clavata

Genomic Location: not available for this species
NR annotation: CAB4035994.1, Chondroitin sulfate ABC exolyase, partial [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families

 Sequence
No sequence record for CAB4035994.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000631 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09092
all species →
Lyase_NLyase, N terminalDomainInterproscan
PF13966
all species →
zf-RVTzinc-binding in reverse transcriptaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008979
all species →
Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR008929
all species →
Homologous_superfamilyChondroitin AC/alginate lyaseInterproscan
IPR015176
all species →
DomainLyase, N-terminalInterproscan
IPR039174
all species →
FamilyChondroitin sulfate ABC lyaseInterproscan
IPR026960
all species →
DomainReverse transcriptase zinc-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37322
all species →
-Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006027
all species →
Biological Processglycosaminoglycan catabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for CAB4035994.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP