Genomic Location: not available for this species
NR annotation: CAB4037059.1, ---NA--- [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB4037059.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q7ZA43 | Glycerol-3-phosphate dehydrogenase [NAD(+)] OS=Pichia angusta OX=870730 GN=GPD PE=3 SV=1 |
| Q59W33 | Glycerol-3-phosphate dehydrogenase [NAD(+)] 2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=GPD2 PE=1 SV=1 |
| Q5XIZ6 | Glycerol-3-phosphate dehydrogenase 1-like protein OS=Danio rerio OX=7955 GN=gpd1l PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0002396 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01210 all species → | NAD_Gly3P_dh_N | NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR011128 all species → | Domain | Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal | Interproscan |
| IPR036291 all species → | Homologous_superfamily | NAD(P)-binding domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11728 all species → | GLYCEROL-3-PHOSPHATE DEHYDROGENASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0016616 all species → | Molecular Function | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | Interproscan |
| GO:0046168 all species → | Biological Process | glycerol-3-phosphate catabolic process | Interproscan |
| GO:0051287 all species → | Molecular Function | NAD binding | Interproscan |
| GO:0004367 all species → | Molecular Function | glycerol-3-phosphate dehydrogenase [NAD(P)+] activity | Interproscan |
| GO:0005829 all species → | Cellular Component | cytosol | Interproscan |
| GO:0006072 all species → | Biological Process | glycerol-3-phosphate metabolic process | Interproscan |
| GO:0006116 all species → | Biological Process | NADH oxidation | Interproscan |
CAB4037059.1.Transcript abundance of CAB4037059.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
