Genomic Location: not available for this species
NR annotation: CAB4037130.1, sodium potassium-transporting ATPase subunit beta-1-like [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB4037130.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| A8X4W9 | Probable sodium/potassium-transporting ATPase subunit beta-3 OS=Caenorhabditis briggsae OX=6238 GN=nkb-3 PE=3 SV=3 |
| Q93235 | Sodium/potassium-transporting ATPase subunit beta-1 OS=Caenorhabditis elegans OX=6239 GN=nkb-1 PE=1 SV=1 |
| Q9XUY5 | Probable sodium/potassium-transporting ATPase subunit beta-3 OS=Caenorhabditis elegans OX=6239 GN=nkb-3 PE=3 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0006491 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00287 all species → | Na_K-ATPase | Sodium / potassium ATPase beta chain | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000402 all species → | Family | Sodium/potassium-transporting ATPase subunit beta | Interproscan |
| IPR038702 all species → | Homologous_superfamily | Sodium/potassium-transporting ATPase subunit beta superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11523 all species → | SODIUM/POTASSIUM-DEPENDENT ATPASE BETA SUBUNIT | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0001671 all species → | Molecular Function | ATPase activator activity | Interproscan |
| GO:0005890 all species → | Cellular Component | sodium:potassium-exchanging ATPase complex | Interproscan |
| GO:0006813 all species → | Biological Process | potassium ion transport | Interproscan |
| GO:0006814 all species → | Biological Process | sodium ion transport | Interproscan |
| GO:0006883 all species → | Biological Process | intracellular sodium ion homeostasis | Interproscan |
| GO:0030007 all species → | Biological Process | intracellular potassium ion homeostasis | Interproscan |
| GO:0036376 all species → | Biological Process | sodium ion export across plasma membrane | Interproscan |
| GO:1990573 all species → | Biological Process | potassium ion import across plasma membrane | Interproscan |
CAB4037130.1.Transcript abundance of CAB4037130.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
