Detailed information of CAB4038492.1 in Paramuricea clavata

Genomic Location: pcla8_s027906:1346...2511
NR annotation: CAB4038492.1, tetratricopeptide repeat, partial [Paramuricea clavata]
Species abbreviation PCLAV · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0014433 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13181
all species →		TPR_8Tetratricopeptide repeatRepeatInterproscan
PF07719
all species →		TPR_2Tetratricopeptide repeatRepeatInterproscan
PF13424
all species →		TPR_12Tetratricopeptide repeatRepeatInterproscan
PF13176
all species →		TPR_7Tetratricopeptide repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051476
all species →		FamilyBacterial Response Regulator Aspartate PhosphataseInterproscan
IPR019734
all species →		RepeatTetratricopeptide repeatInterproscan
IPR013105
all species →		RepeatTetratricopeptide repeat 2Interproscan
IPR011990
all species →		Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46630
all species →		TETRATRICOPEPTIDE REPEAT PROTEIN 29Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for CAB4038492.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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