Detailed information of CAB4038643.1 in Paramuricea clavata

Genomic Location: not available for this species
NR annotation: CAB4038643.1, striatin-3-like isoform X2, partial [Paramuricea clavata]
Species abbreviation PCLAV · all data for this species · gene families

 Sequence
No sequence record for CAB4038643.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O43815Striatin OS=Homo sapiens OX=9606 GN=STRN PE=1 SV=4
Q9ERG2Striatin-3 OS=Mus musculus OX=10090 GN=Strn3 PE=1 SV=1
Q13033Striatin-3 OS=Homo sapiens OX=9606 GN=STRN3 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005423 (this species only)
Ubiquitin familyUBD|Other|Beta-prp · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|CDC20 · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|DWD · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400
all species →
WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR020472
all species →
RepeatG-protein beta WD-40 repeatInterproscan
IPR001680
all species →
RepeatWD40 repeatInterproscan
IPR015943
all species →
Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036322
all species →
Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR019775
all species →
Conserved_siteWD40 repeat, conserved siteInterproscan
IPR051488
all species →
FamilyWD repeat-containing striatinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15653
all species →
STRIATINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for CAB4038643.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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