Genomic Location: not available for this species
NR annotation: CAB4038786.1, 5-aminolevulinate synthase, erythroid-specific, mitochondrial-like [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB4038786.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| P43090 | 5-aminolevulinate synthase, erythroid-specific, mitochondrial OS=Opsanus tau OX=8068 GN=alas2 PE=2 SV=1 |
| P43091 | 5-aminolevulinate synthase, non-specific, mitochondrial OS=Opsanus tau OX=8068 GN=alas1 PE=2 SV=1 |
| Q3ZC31 | 5-aminolevulinate synthase, erythroid-specific, mitochondrial OS=Bos taurus OX=9913 GN=ALAS2 PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0004241 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00155 all species → | Aminotran_1_2 | Aminotransferase class I and II | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR050087 all species → | Family | 8-amino-7-oxononanoate synthase class-II | Interproscan |
| IPR015424 all species → | Homologous_superfamily | Pyridoxal phosphate-dependent transferase | Interproscan |
| IPR004839 all species → | Domain | Aminotransferase, class I/classII | Interproscan |
| IPR015421 all species → | Homologous_superfamily | Pyridoxal phosphate-dependent transferase, major domain | Interproscan |
| IPR001917 all species → | Binding_site | Aminotransferase, class-II, pyridoxal-phosphate binding site | Interproscan |
| IPR015422 all species → | Homologous_superfamily | Pyridoxal phosphate-dependent transferase, small domain | Interproscan |
| IPR010961 all species → | Domain | Tetrapyrrole biosynthesis, 5-aminolevulinic acid synthase | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13693 all species → | CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003870 all species → | Molecular Function | 5-aminolevulinate synthase activity | Interproscan |
| GO:0005739 all species → | Cellular Component | mitochondrion | Interproscan |
| GO:0006783 all species → | Biological Process | heme biosynthetic process | Interproscan |
| GO:0009058 all species → | Biological Process | biosynthetic process | Interproscan |
| GO:0030170 all species → | Molecular Function | pyridoxal phosphate binding | Interproscan |
| GO:0016740 all species → | Molecular Function | transferase activity | Interproscan |
| GO:0033014 all species → | Biological Process | tetrapyrrole biosynthetic process | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K00643 | E2.3.1.37, ALAS; 5-aminolevulinate synthase | EC:2.3.1.37 | Amino acid related enzymes | ko01007 | deepkoala |
Transcript abundance of CAB4038786.1 across 21 RNA-seq samples of Paramuricea clavata. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 6 | 6.96 | 28.66 | |
| apical branchlet · Temperature treatment at T0 | 6 | 6 | 12.94 | 32.25 | |
| apical branchlet · Temperature treatment at T25 | 5 | 5 | 12.95 | 16.50 | |
| apical branchlet · Control at T0 | 4 | 3 | 5.55 | 15.20 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
