Detailed information of CAB4039073.1 in Paramuricea clavata

Genomic Location: pcla8_s028868:228...2462
NR annotation: CAB4039073.1, Small glutamine-rich tetratricopeptide repeat-containing alpha [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9D706RNA polymerase II-associated protein 3 OS=Mus musculus OX=10090 GN=Rpap3 PE=1 SV=1
Q9H6T3RNA polymerase II-associated protein 3 OS=Homo sapiens OX=9606 GN=RPAP3 PE=1 SV=2
Q68FQ7RNA polymerase II-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Rpap3 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13229Beta_helixRight handed beta helix regionRepeatInterproscan
PF01753zf-MYNDMYND fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR039448DomainRight handed beta helix domainInterproscan
IPR002893DomainZinc finger, MYND-typeInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR011050Homologous_superfamilyPectin lyase fold/virulence factorInterproscan
IPR047150FamilySGTInterproscan
IPR022441RepeatParallel beta-helix repeat-2Interproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR006626RepeatParallel beta-helix repeatInterproscan
IPR012334Homologous_superfamilyPectin lyase foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45831LD24721PInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0006620Biological Processpost-translational protein targeting to endoplasmic reticulum membraneInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0060090Molecular Functionmolecular adaptor activityInterproscan
GO:0072380Cellular ComponentTRC complexInterproscan

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