Genomic Location: not available for this species
NR annotation: CAB4039756.1, Hypothetical predicted protein, partial [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB4039756.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q8K389 | CDK5 regulatory subunit-associated protein 2 OS=Mus musculus OX=10090 GN=Cdk5rap2 PE=1 SV=3 |
| Q9BE52 | CDK5 regulatory subunit-associated protein 2 OS=Macaca fascicularis OX=9541 GN=CDK5RAP2 PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0001978 (this species only) |
CAB4039756.1. This gene does have a gene model — the search simply returned no hit.| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR042791 all species → | Family | CDK5 regulatory subunit-associated protein 2 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46930 all species → | CDK5 REGULATORY SUBUNIT-ASSOCIATED PROTEIN 2 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0000132 all species → | Biological Process | establishment of mitotic spindle orientation | Interproscan |
| GO:0000226 all species → | Biological Process | microtubule cytoskeleton organization | Interproscan |
| GO:0000242 all species → | Cellular Component | pericentriolar material | Interproscan |
| GO:0000976 all species → | Molecular Function | transcription cis-regulatory region binding | Interproscan |
| GO:0001578 all species → | Biological Process | microtubule bundle formation | Interproscan |
| GO:0005516 all species → | Molecular Function | calmodulin binding | Interproscan |
| GO:0007059 all species → | Biological Process | chromosome segregation | Interproscan |
| GO:0007099 all species → | Biological Process | centriole replication | Interproscan |
| GO:0008017 all species → | Molecular Function | microtubule binding | Interproscan |
| GO:0019901 all species → | Molecular Function | protein kinase binding | Interproscan |
| GO:0031116 all species → | Biological Process | positive regulation of microtubule polymerization | Interproscan |
| GO:0035371 all species → | Cellular Component | microtubule plus-end | Interproscan |
| GO:0043015 all species → | Molecular Function | gamma-tubulin binding | Interproscan |
| GO:0045893 all species → | Biological Process | positive regulation of DNA-templated transcription | Interproscan |
| GO:0046600 all species → | Biological Process | negative regulation of centriole replication | Interproscan |
| GO:0048471 all species → | Cellular Component | perinuclear region of cytoplasm | Interproscan |
| GO:0090266 all species → | Biological Process | regulation of mitotic cell cycle spindle assembly checkpoint | Interproscan |
| GO:0097431 all species → | Cellular Component | mitotic spindle pole | Interproscan |
CAB4039756.1.Transcript abundance of CAB4039756.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
