Detailed information of CAB4040317.1 in Paramuricea clavata

Genomic Location: not available for this species
NR annotation: CAB4040317.1, PHD finger-like domain-containing 5A, partial [Paramuricea clavata]
Species abbreviation PCLAV · all data for this species · gene families

 Sequence
No sequence record for CAB4040317.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q7RTV0PHD finger-like domain-containing protein 5A OS=Homo sapiens OX=9606 GN=PHF5A PE=1 SV=1
P83870PHD finger-like domain-containing protein 5A OS=Mus musculus OX=10090 GN=Phf5a PE=1 SV=1
P83871PHD finger-like domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Phf5a PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009672 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03660
all species →
PHF5PHF5-like proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005345
all species →
FamilyPHF5-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13120
all species →
PHD FINGER-LIKE DOMAIN-CONTAINING PROTEIN 5AInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000398
all species →
Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0005686
all species →
Cellular ComponentU2 snRNPInterproscan
GO:0005689
all species →
Cellular ComponentU12-type spliceosomal complexInterproscan
GO:0071011
all species →
Cellular Componentprecatalytic spliceosomeInterproscan
GO:0071013
all species →
Cellular Componentcatalytic step 2 spliceosomeInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for CAB4040317.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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