Detailed information of CAB4041077.1 in Paramuricea clavata

Genomic Location: not available for this species
NR annotation: CAB4041077.1, ubiquitin carboxyl-terminal hydrolase MINDY-3 isoform X2, partial [Paramuricea clavata]
Species abbreviation PCLAV · all data for this species · gene families

 Sequence
No sequence record for CAB4041077.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9H8M7Ubiquitin carboxyl-terminal hydrolase MINDY-3 OS=Homo sapiens OX=9606 GN=MINDY3 PE=1 SV=1
Q4R528Ubiquitin carboxyl-terminal hydrolase MINDY-3 OS=Macaca fascicularis OX=9541 GN=MINDY3 PE=2 SV=1
A0AUR5Ubiquitin carboxyl-terminal hydrolase MINDY-3 OS=Danio rerio OX=7955 GN=mindy3 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008250 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13898
all species →
MINDY-3_4_CDDeubiquitinating enzyme MINDY-3/4, conserved domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR039785
all species →
FamilyDeubiquitinating enzyme MINDY-3/4Interproscan
IPR002048
all species →
DomainEF-hand domainInterproscan
IPR025257
all species →
DomainDeubiquitinating enzyme MINDY-3/4, conserved domainInterproscan
IPR011992
all species →
Homologous_superfamilyEF-hand domain pairInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12473
all species →
UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004843
all species →
Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0071108
all species →
Biological Processprotein K48-linked deubiquitinationInterproscan
GO:1990380
all species →
Molecular FunctionK48-linked deubiquitinase activityInterproscan
GO:0005509
all species →
Molecular Functioncalcium ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for CAB4041077.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP