Genomic Location: pcla8_s037668:673...1995
NR annotation: CAB4042545.1, Transposon Ty3-G Gag-Pol poly [Paramuricea clavata]
| CDS |
| PACLA_8A059783 |
| Transcript |
| rna-PACLA_8A059783 |
| Protein |
| CAB4042545.1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF03732 | Retrotrans_gag | Retrotransposon gag protein | Family | Interproscan |
| PF00098 | zf-CCHC | Zinc knuckle | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR005162 | Domain | Retrotransposon gag domain | Interproscan |
| IPR001878 | Domain | Zinc finger, CCHC-type | Interproscan |
| IPR021109 | Homologous_superfamily | Aspartic peptidase domain superfamily | Interproscan |
| IPR001969 | Active_site | Aspartic peptidase, active site | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| - | - | - |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0004190 | Molecular Function | aspartic-type endopeptidase activity | Interproscan |
| GO:0006508 | Biological Process | proteolysis | Interproscan |
