Genomic Location: not available for this species
NR annotation: CAB4044120.1, deoxyribonuclease-1 isoform X1, partial [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB4044120.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| P24855 | Deoxyribonuclease-1 OS=Homo sapiens OX=9606 GN=DNASE1 PE=1 SV=1 |
| Q4AEE3 | Deoxyribonuclease-1 OS=Equus caballus OX=9796 GN=DNASE1 PE=2 SV=1 |
| P00639 | Deoxyribonuclease-1 OS=Bos taurus OX=9913 GN=DNASE1 PE=1 SV=3 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0001730 (this species only) |
CAB4044120.1. This gene does have a gene model — the search simply returned no hit.| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR036691 all species → | Homologous_superfamily | Endonuclease/exonuclease/phosphatase superfamily | Interproscan |
| IPR016202 all species → | Family | Deoxyribonuclease I | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11371 all species → | DEOXYRIBONUCLEASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0004536 all species → | Molecular Function | DNA nuclease activity | Interproscan |
| GO:0006308 all species → | Biological Process | DNA catabolic process | Interproscan |
| GO:0000737 all species → | Biological Process | obsolete DNA catabolic process, endonucleolytic | Interproscan |
| GO:0003677 all species → | Molecular Function | DNA binding | Interproscan |
| GO:0004530 all species → | Molecular Function | deoxyribonuclease I activity | Interproscan |
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
CAB4044120.1.Transcript abundance of CAB4044120.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
