Detailed information of CAB4045422.1 in Paramuricea clavata

Genomic Location: pcla8_s056295:28...1078
NR annotation: CAB4045422.1, Tetratricopeptide repeat 28, partial [Paramuricea clavata]
Species abbreviation PCLAV · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0013121 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13424
all species →
TPR_12Tetratricopeptide repeatRepeatInterproscan
PF17874
all species →
TPR_MalTMalT-like TPR regionRepeatInterproscan
PF13181
all species →
TPR_8Tetratricopeptide repeatRepeatInterproscan
PF00515
all species →
TPR_1Tetratricopeptide repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019734
all species →
RepeatTetratricopeptide repeatInterproscan
IPR011990
all species →
Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR052386
all species →
FamilyG-protein-signaling modulatorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45954
all species →
LD33695PInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0000132
all species →
Biological Processestablishment of mitotic spindle orientationInterproscan
GO:0001965
all species →
Molecular FunctionG-protein alpha-subunit bindingInterproscan
GO:0005092
all species →
Molecular FunctionGDP-dissociation inhibitor activityInterproscan
GO:0005938
all species →
Cellular Componentcell cortexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for CAB4045422.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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