Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Porites evermanni · all data for this species · gene families
CAH3194278.1 in PEVER (the gene ID may belong to a different isoform naming scheme). Try the gene search.| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000507 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13927 all species → | Ig_3 | Immunoglobulin domain | Domain | Interproscan |
| PF00014 all species → | Kunitz_BPTI | Kunitz/Bovine pancreatic trypsin inhibitor domain | Domain | Interproscan |
| PF00095 all species → | WAP | WAP-type (Whey Acidic Protein) 'four-disulfide core' | Domain | Interproscan |
| PF00086 all species → | Thyroglobulin_1 | Thyroglobulin type-1 repeat | Domain | Interproscan |
| PF07648 all species → | Kazal_2 | Kazal-type serine protease inhibitor domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR008197 all species → | Domain | WAP-type 'four-disulfide core' domain | Interproscan |
| IPR007110 all species → | Domain | Immunoglobulin-like domain | Interproscan |
| IPR036058 all species → | Homologous_superfamily | Kazal domain superfamily | Interproscan |
| IPR036645 all species → | Homologous_superfamily | Elafin-like superfamily | Interproscan |
| IPR000716 all species → | Domain | Thyroglobulin type-1 | Interproscan |
| IPR020901 all species → | Conserved_site | Proteinase inhibitor I2, Kunitz, conserved site | Interproscan |
| IPR036857 all species → | Homologous_superfamily | Thyroglobulin type-1 superfamily | Interproscan |
| IPR002223 all species → | Domain | Pancreatic trypsin inhibitor Kunitz domain | Interproscan |
| IPR036880 all species → | Homologous_superfamily | Pancreatic trypsin inhibitor Kunitz domain superfamily | Interproscan |
| IPR002350 all species → | Domain | Kazal domain | Interproscan |
| IPR003599 all species → | Domain | Immunoglobulin subtype | Interproscan |
| IPR003645 all species → | Domain | Follistatin-like, N-terminal | Interproscan |
| IPR036179 all species → | Homologous_superfamily | Immunoglobulin-like domain superfamily | Interproscan |
| IPR051388 all species → | Family | Serine protease inhibitor and venom toxin | Interproscan |
| IPR013783 all species → | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46751 all species → | EPPIN | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005576 all species → | Cellular Component | extracellular region | Interproscan |
| GO:0030414 all species → | Molecular Function | peptidase inhibitor activity | Interproscan |
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0004867 all species → | Molecular Function | serine-type endopeptidase inhibitor activity | Interproscan |
| GO:0005615 all species → | Cellular Component | extracellular space | Interproscan |
| GO:0010466 all species → | Biological Process | negative regulation of peptidase activity | Interproscan |
CAH3194278.1.Genes whose expression across the transcriptome samples of Porites evermanni tracks this one. Counts are over the whole network; the network view itself draws at most 100 partners per query gene (CNIDO_NET_TOP_K), so a hub gene can show fewer edges than the number below.
No co-expression network has been built for this species, so this gene has no partners to show. Networks are available for the species listed on the Network Analysis page.
Whether this gene can be visualised in the single-cell atlases of Porites evermanni, and in which cell types it is a marker. Expression is stored per cell, so the violin plot and the cell-type means are computed in the viewer — open a dataset to see them.
No single-cell dataset has been published for this species. The atlases that do exist are listed in the Cell Atlas.
Chromatin and DNA-methylation data covering this gene. Peak calls are listed per sample with the genomic region the peak falls in; DNA methylation is listed as sample availability only, because those tables are queried by the DNA Methylation page itself.
No epigenomic data has been deposited for this species. The assays that exist across the site are described in the Epigenomic Data module.
Every tool below opens with this gene already entered, so you land on the analysis rather than on an empty form. Links open in a new tab.
| Analysis | What it does | Status | |
|---|---|---|---|
| Primer design | Design PCR / qPCR primers on this gene’s sequence with the published primer3 settings. Opens with the primers already computed. | not in the sequence table | open → |
| BLAST | Search this gene’s sequence against the CnidoSite BLAST databases. The query is filled in and the species’ database is preselected — press Run to start. | not in the sequence table | open → |
| Expression heatmap | Draw this gene’s expression as a heatmap across all RNA-seq samples, and compare it with the genes you add next to it. | no expression matrix | – |
| Gene family / orthogroup | Look this gene up in the single-copy orthogroups built from the high-quality cnidarian genomes, and see which other species carry an orthologue. | open → | |
| Gene set analysis | Start a gene-set enrichment analysis with this gene as the seed list. Add more genes on that page before running it. | open → |
