Detailed information of Csp0G034110 in Chrysogorgia sp. JL179-B06

Genomic Location: Contig00090:17981...22246
NR annotation: no NCBI-NR hit recorded
Species abbreviation CSP1 · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03587
all species →		EMG1EMG1/NEP1 methyltransferaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029028
all species →		Homologous_superfamilyAlpha/beta knot methyltransferasesInterproscan
IPR029026
all species →		Homologous_superfamilytRNA (guanine-N1-)-methyltransferase, N-terminalInterproscan
IPR005304
all species →		FamilyRibosomal biogenesis, methyltransferase, EMG1/NEP1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12636
all species →		NEP1/MRA1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005730
all species →		Cellular ComponentnucleolusInterproscan
GO:0019843
all species →		Molecular FunctionrRNA bindingInterproscan
GO:0032040
all species →		Cellular Componentsmall-subunit processomeInterproscan
GO:0070037
all species →		Molecular FunctionrRNA (pseudouridine) methyltransferase activityInterproscan
GO:0070475
all species →		Biological ProcessrRNA base methylationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K14568EMG1, NEP1; rRNA small subunit pseudouridine methyltransferase Nep1EC:2.1.1.260
Ribosome biogenesisko03009deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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