Detailed information of Csp0G034280 in Chrysogorgia sp. JL179-B06

Genomic Location: Contig00090:278125...291006
NR annotation: no NCBI-NR hit recorded
Species Chrysogorgia sp. JL179-B06 · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Ubiquitin familyE3|E3 activity RING|RING · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18212
all species →
ZNRF_3_ectoZNRF-3 EctodomainDomainInterproscan
PF13639
all species →
zf-RING_2Ring finger domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR040700
all species →
DomainZNRF-3, ectodomainInterproscan
IPR001841
all species →
DomainZinc finger, RING-typeInterproscan
IPR051073
all species →
FamilyZNRF3/Arkadia E3 ubiquitin-protein ligasesInterproscan
IPR013083
all species →
Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16200
all species →
RING ZINC FINGERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006511
all species →
Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0061630
all species →
Molecular Functionubiquitin protein ligase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for Csp0G034280.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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