Gene detail

Detailed information of Csp0G040370 in Chrysogorgia sp. JL179-B06

Genomic Location: Contig00099:647413...700926
NR annotation: no NCBI-NR hit recorded
Species Chrysogorgia sp. JL179-B06 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Csp0G040370

ATGGCGACCCTGGAAGTTGACAGTATGACCTTTGCAAAAAGTTTTACTACACCAGCTAAGCATAACAAACAAGTCCCAAATCACTTACTGGAGACAAAAATCTTTAGCAAAGTTTCCGAAAATGAAGTTTTTCAAACCTGTCCTTCAAGCATACATTTCACTGGATATGAAATTAAAAAGACGACTAAACAGATTCTGAAATTGATAAATATTTCTTCACAATGTCAAAGAATGCATATAATACCACCAACAACATCTTATTTCAAGATTAAATATATCAAAAAGGAAAGACTAGTTCCAGGATTTTTTGTGGAAATTGTGGTGGAATTCACCCCAAAAGATTGGCGATACTATCATGATTGCATCCGAATTCATTGCCAGTCTAACGAAAATTTGGTTGTCCCAATTCACGGTTATCCTGCATTAAAACTGTCAGACTTTCCTAGTAAAATCAACTTTGGAGCAGTTCCTGTTGGTGAAAGTGAAATCCGAAACATTTCATTGAAATCCGACATTCCTGTTGATTTTGAGTTCCAACTGAGCCTCTTACAGTCCCTACCTGCTATTAAAATTGAACCTAAAAAAGGAATAATTTATGGATGTAGTACTTTGGTTATCAATGTGACATTTAGTCCAACAGAATTTTGTACAGTTCACAGTAAGTTACAGCTTCTGGTGTCACAATTTAATGCCTCACCTCAGATTTGTCACATCACTGGAAGTTCAGCTCCAGGACTAAAGTTAAAAACATTGTTAGGTAAATCAAATGGTGATGTGCGTGAAGATCATGAAGCAGTCACGAAAACCACAACTGCCGCATTAGATCCTGTCTCTATTGATCCGTTGTACCGATCAAGGTTTAAAAAACTTGGAAAAACACGGATATGGGCACCTCCGAATGATCTTAAAAATGAGGAATTGATTCGCAATGGAATAAGATTTCCGAAAATCTTAACTAATCCAAGTGCTGTCTCCTATGTTCTGCAACAGCAACCGGGAAAACTGAAAGCCAAAGATATCAGAGAAGCTGTCAAGCAAAAGAAAGATGTCCCACTTAGCACTAAACAACTAAAGGAGACTATTTTTCAATACAAAGTTCAACAAGATGTTTTAGAAGAAAGGCAGAATCAACTTCGCTGGTGTGTCAAGCTTGGGGAAGATGAAATTTTAGACGAAGATAAAAATAAACTTCTAGAGGAACGTGCATTGGCAGAAAAAGAATACAAGATAATGAGAGGTGATCCTGTTGCTGATGTTGAATTTGATCGTTCGTGCACAAATTGTTCTCAACAAAGAATTCATCGACAAGCAAACGCTATTCCGGGGTATACTGCCAGGTTTGATTCATTTGTTAACGATGACTGGACGAAAAGGCATCGAATCTTGAGAAGATTTATTCAGGCAGGTCGAAAGGTTATCGTTCGTCGTCGAGCCACGGGACATTTACGGTGTTTACATCGGTATCTTAGCGACTGGAAGGATGGAAAGTTTACCATTGATCACACTCGAACCAAACACAGTAAATCTGTGGAGGAACGCATTATTTCGACACCATTTCAAATCAAACCTGAAATGGTGTCATCTTTCTCATTTCCTATGTATAAAAACCAAGATGATAACGAAGATGGCATCTCAAATTCTTTGGGGCAATTATCTGTTGAATCTACAGTCGTTCAAGTCGAACCTTACGTACCTTACTTCAACTTAAAGGTTCCTCAACAATACTCTTTACTTGGTTATAAACCACACATCAGCCAGTCGTCTGCTATTCATGGTCATGTTCCTAAGCATTTAGTTCGACCGTTGCGATCAGGTGCAGAGGATGAAGTAATTAACCTGGTATCTACACTACCACACACAAACAATAGTAATATACTCGAAATACCAATTACAGTGGATGAAAACGAGGAAGGTCCTAACACAGTTGAAAACGCCATGAGTGAAACTCAACAGTTATTACAAGATGCTGAAGCTCAAAGAGAGGACGTCACGACAGCTGGAGGCAAATCAAGACTGATTATTCCAACAATCTTCTTTAAACAACCAAAATATCATCCTTTACAGATATTTAATCCCTCGCCTGATCTACATGTTTTACAGCCACAAGTATCTTACTCTGAAGTCGACGAAGATTATAATCTTTGTCCTTTACCACGCTACAAGTTAACCAATAAGAGCGGAACAAATAAGCCAGCTAAAGCGTTCATAGAAAGTCCGGATGTCATATCAGGATTGATGACGTGGAAAAGATTTCCTTGTCAAAGTCTCGTCAGTAGCAGTAATATGCCAAATCTTATTGACGTTTGGGTGCCACGATGGACTAGTCCTTTTGTTCATGATCTTTTACCCAAAGAGACACCAGAACTACTTCAAGAATTACCACAAGACGACGAGATGAGTGACACAGAGTCCCATGATGATGATGTGACAGACAGTCCAGGAAACCCTGCCGTTCTTTCACCAGATATGGTGGCAGCAATGTTTCCTTTGGTTAAAGCGCCTGGTACCCAAGAACAACAAAGTTGTGAAACGTTTCCACGGAATGGAAAGTTACCAGCTAGCAATAACCCTATTTCTTGTAATGGACGCATACCAAGAAATGAACGAGAAAACGAACTGATAACGTATGTTAAAACTTACAATGACCGCCTTGGGCGTTTGGTCGGACAGAAAGTACAGGAAATGAACAGTTTATTAAAGGATGATAATCTAAAGATGCCATTATAG

Transcript

Csp0G040370

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15780 all species →	ASH	Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029676 all species →	Family	Cilia- and flagella-associated protein 221	Interproscan
IPR031549 all species →	Domain	Abnormal spindle-like microcephaly-associated protein, ASH domain	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46500 all species →	CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 221	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003341 all species →	Biological Process	cilium movement	Interproscan
GO:0005929 all species →	Cellular Component	cilium	Interproscan
GO:0044458 all species →	Biological Process	motile cilium assembly	Interproscan
GO:0060271 all species →	Biological Process	cilium assembly	Interproscan
GO:0097729 all species →	Cellular Component	9+2 motile cilium	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K25610	CFAP221, PCDP1; cilia- and flagella-associated protein 221	-	Cilium and associated proteins	ko03037	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.