Gene detail

Detailed information of Csp0G043340 in Chrysogorgia sp. JL179-B06

Genomic Location: Contig00099:6070781...6072400
NR annotation: no NCBI-NR hit recorded
Species Chrysogorgia sp. JL179-B06 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03175 all species →	DNA_pol_B_2	DNA polymerase type B, organellar and viral	Family	Interproscan
PF02945 all species →	Endonuclease_7	Recombination endonuclease VII	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004868 all species →	Domain	DNA-directed DNA polymerase, family B, mitochondria/virus	Interproscan
IPR044925 all species →	Homologous_superfamily	His-Me finger superfamily	Interproscan
IPR004211 all species →	Family	Recombination endonuclease VII	Interproscan
IPR043502 all species →	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR036397 all species →	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR012337 all species →	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31511 all species →	PROTEIN CBG23764	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000166 all species →	Molecular Function	nucleotide binding	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0003887 all species →	Molecular Function	DNA-directed DNA polymerase activity	Interproscan
GO:0006260 all species →	Biological Process	DNA replication	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for Csp0G043340.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.