Genomic Location: Contig00101:1713443...1719249
NR annotation: no NCBI-NR hit recorded
Species Chrysogorgia sp. JL179-B06 · all data for this species · gene families
| CDS |
| Csp0G046000 |
| Transcript |
| Csp0G046000 |
| Protein |
| Csp0G046000 |
| Family type | Membership / link |
|---|---|
| Ubiquitin family | E3|E3 adaptor Cullin RING|SOCS · all ubiquitin genes in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF07525 all species → | SOCS_box | SOCS box | Domain | Interproscan |
| PF00622 all species → | SPRY | SPRY domain | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR043136 all species → | Homologous_superfamily | B30.2/SPRY domain superfamily | Interproscan |
| IPR001870 all species → | Domain | B30.2/SPRY domain | Interproscan |
| IPR001496 all species → | Domain | SOCS box domain | Interproscan |
| IPR013320 all species → | Homologous_superfamily | Concanavalin A-like lectin/glucanase domain superfamily | Interproscan |
| IPR050672 all species → | Family | F-box/SPRY and SOCS box protein families | Interproscan |
| IPR003877 all species → | Domain | SPRY domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12245 all species → | SPRY DOMAIN CONTAINING SOCS BOX PROTEIN | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0019005 all species → | Cellular Component | SCF ubiquitin ligase complex | Interproscan |
| GO:0043161 all species → | Biological Process | proteasome-mediated ubiquitin-dependent protein catabolic process | Interproscan |
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K10343 | SPSB1_4, SSB1, SSB4; SPRY domain-containing SOCS box protein 1/4 | - | Ubiquitin system | ko04121 | deepkoala |
