Detailed information of Csp0G056980 in Chrysogorgia sp. JL179-B06

Genomic Location: Contig00122:36891...44586
NR annotation: no NCBI-NR hit recorded
Species Chrysogorgia sp. JL179-B06 · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Transcription factor familySRF · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00319
all species →
SRF-TFSRF-type transcription factor (DNA-binding and dimerisation domain)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002100
all species →
DomainTranscription factor, MADS-boxInterproscan
IPR036879
all species →
Homologous_superfamilyTranscription factor, MADS-box superfamilyInterproscan
IPR033897
all species →
DomainMADS SRF-likeInterproscan
IPR050142
all species →
FamilyMADS-box/MEF2 Transcription FactorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48019
all species →
SERUM RESPONSE FACTOR HOMOLOGInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →
Molecular FunctionDNA bindingInterproscan
GO:0046983
all species →
Molecular Functionprotein dimerization activityInterproscan
GO:0000981
all species →
Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0000987
all species →
Molecular Functioncis-regulatory region sequence-specific DNA bindingInterproscan
GO:0045944
all species →
Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan
GO:0000978
all species →
Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0006357
all species →
Biological Processregulation of transcription by RNA polymerase IIInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for Csp0G056980.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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