Gene detail

Detailed information of Csp0G077760 in Chrysogorgia sp. JL179-B06

Genomic Location: Contig00143:3129625...3136415
NR annotation: no NCBI-NR hit recorded
Species Chrysogorgia sp. JL179-B06 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004632 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02037 all species →	SAP	SAP domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036361 all species →	Homologous_superfamily	SAP domain superfamily	Interproscan
IPR050577 all species →	Family	Cytochrome b5/MAPR and VMP1 families	Interproscan
IPR003034 all species →	Domain	SAP domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10281 all species →	MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005783 all species →	Cellular Component	endoplasmic reticulum	Interproscan
GO:0006914 all species →	Biological Process	autophagy	Interproscan
GO:0007030 all species →	Biological Process	Golgi organization	Interproscan
GO:0012505 all species →	Cellular Component	endomembrane system	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K21248	VMP1; vacuole membrane protein 1	-	Autophagy - animal	ko04140	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.