Gene detail

Detailed information of Csp0G090370 in Chrysogorgia sp. JL179-B06

Genomic Location: Contig00152:1119683...1120813
NR annotation: no NCBI-NR hit recorded
Species Chrysogorgia sp. JL179-B06 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01250 all species →	Ribosomal_S6	Ribosomal protein S6	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014717 all species →	Homologous_superfamily	Translation elongation factor EF1B/small ribosomal subunit protein bS6	Interproscan
IPR000529 all species →	Family	Small ribosomal subunit protein bS6	Interproscan
IPR035980 all species →	Homologous_superfamily	Small ribosomal subunit protein bS6 superfamily	Interproscan
IPR020814 all species →	Family	Small ribosomal subunit protein bS6, plastid/chloroplast	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21011 all species →	MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0019843 all species →	Molecular Function	rRNA binding	Interproscan
GO:0005763 all species →	Cellular Component	mitochondrial small ribosomal subunit	Interproscan
GO:0070181 all species →	Molecular Function	small ribosomal subunit rRNA binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02990	RP-S6, MRPS6, rpsF; small subunit ribosomal protein S6	-	Ribosome	ko03011	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.