Detailed information of Csp0G093340 in Chrysogorgia sp. JL179-B06

Genomic Location: Contig00160:407370...408638
NR annotation: no NCBI-NR hit recorded
Species Chrysogorgia sp. JL179-B06 · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03732
all species →		Retrotrans_gagRetrotransposon gag protein FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR021109
all species →		Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR036875
all species →		Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR005162
all species →		DomainRetrotransposon gag domainInterproscan
IPR001878
all species →		DomainZinc finger, CCHC-typeInterproscan
IPR001969
all species →		Active_siteAspartic peptidase, active siteInterproscan

 PANTHER
No PANTHER signature was detected for Csp0G093340. This gene does have a gene model — the search simply returned no hit.
 Gene Ontology
GO termCategoryDescriptionSource
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan
GO:0008270
all species →		Molecular Functionzinc ion bindingInterproscan
GO:0004190
all species →		Molecular Functionaspartic-type endopeptidase activityInterproscan
GO:0006508
all species →		Biological ProcessproteolysisInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for Csp0G093340.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP