Detailed information of Csp0G093660 in Chrysogorgia sp. JL179-B06

Genomic Location: Contig00160:1092962...1121760
NR annotation: no NCBI-NR hit recorded
Species Chrysogorgia sp. JL179-B06 · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Ubiquitin familyE3|E3 activity RING|RING · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02225
all species →
PAPA domainFamilyInterproscan
PF13639
all species →
zf-RING_2Ring finger domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001841
all species →
DomainZinc finger, RING-typeInterproscan
IPR046450
all species →
Homologous_superfamilyPA domain superfamilyInterproscan
IPR013083
all species →
Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR003137
all species →
DomainPA domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46539
all species →
E3 UBIQUITIN-PROTEIN LIGASE ATL42Interproscan

 Gene Ontology
No Gene Ontology signature was detected for Csp0G093660. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for Csp0G093660.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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