Detailed information of Csp0G128560 in Chrysogorgia sp. JL179-B06

Genomic Location: Contig00221:144559...147055
NR annotation: no NCBI-NR hit recorded
Species abbreviation CSP1 · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00456
all species →
Transketolase_NTransketolase, thiamine diphosphate binding domainDomainInterproscan
PF02779
all species →
Transket_pyrTransketolase, pyrimidine binding domainDomainInterproscan
PF09285
all species →
Elong-fact-P_CElongation factor P, C-terminalDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029061
all species →
Homologous_superfamilyThiamin diphosphate-binding foldInterproscan
IPR005475
all species →
DomainTransketolase-like, pyrimidine-binding domainInterproscan
IPR005474
all species →
DomainTransketolase, N-terminalInterproscan
IPR020826
all species →
Binding_siteTransketolase binding siteInterproscan
IPR015365
all species →
DomainElongation factor P, C-terminalInterproscan
IPR012340
all species →
Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR033247
all species →
FamilyTransketolase familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43522
all species →
TRANSKETOLASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan
GO:0043043
all species →
Biological Processpeptide biosynthetic processInterproscan
GO:0004802
all species →
Molecular Functiontransketolase activityInterproscan
GO:0005829
all species →
Cellular ComponentcytosolInterproscan
GO:0006098
all species →
Biological Processpentose-phosphate shuntInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for Csp0G128560.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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