Gene detail

Detailed information of Csp0G167410 in Chrysogorgia sp. JL179-B06

Genomic Location: Contig00328:702584...704731
NR annotation: no NCBI-NR hit recorded
Species Chrysogorgia sp. JL179-B06 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00261 all species →	Tropomyosin	Tropomyosin	Coiled-coil	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000533 all species →	Family	Tropomyosin	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19269 all species →	TROPOMYOSIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005884 all species →	Cellular Component	actin filament	Interproscan
GO:0006936 all species →	Biological Process	muscle contraction	Interproscan
GO:0007015 all species →	Biological Process	actin filament organization	Interproscan
GO:0051015 all species →	Molecular Function	actin filament binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10374	TPM2; tropomyosin 2	-	Cytoskeleton proteins	ko04812	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.