Gene detail

Detailed information of Csp0G212780 in Chrysogorgia sp. JL179-B06

Genomic Location: Contig00429:1892635...1905765
NR annotation: no NCBI-NR hit recorded
Species abbreviation CSP1 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03985 all species →	Paf1	Paf1	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007133 all species →	Family	RNA polymerase II associated factor Paf1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23188 all species →	RNA POLYMERASE II-ASSOCIATED FACTOR 1 HOMOLOG	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000993 all species →	Molecular Function	RNA polymerase II complex binding	Interproscan
GO:0003682 all species →	Molecular Function	chromatin binding	Interproscan
GO:0006368 all species →	Biological Process	transcription elongation by RNA polymerase II	Interproscan
GO:0016593 all species →	Cellular Component	Cdc73/Paf1 complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15174	PAF1; RNA polymerase II-associated factor 1	-	Transcription machinery	ko03021	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.