Gene detail

Detailed information of Csp0G214860 in Chrysogorgia sp. JL179-B06

Genomic Location: Contig00436:518557...522425
NR annotation: no NCBI-NR hit recorded
Species Chrysogorgia sp. JL179-B06 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07145 all species →	PAM2	Ataxin-2 C-terminal region	Motif	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR040396 all species →	Family	Polyadenylate-binding protein-interacting protein 2-like	Interproscan
IPR009818 all species →	Domain	Ataxin-2, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13154 all species →	POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000900 all species →	Molecular Function	mRNA regulatory element binding translation repressor activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0017148 all species →	Biological Process	negative regulation of translation	Interproscan
GO:0030371 all species →	Molecular Function	translation repressor activity	Interproscan
GO:0045947 all species →	Biological Process	negative regulation of translational initiation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for Csp0G214860.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.