Detailed information of Csp0G305380 in Chrysogorgia sp. JL179-B06

Genomic Location: Contig00570:1310201...1321800
NR annotation: no NCBI-NR hit recorded
Species Chrysogorgia sp. JL179-B06 · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Transcription factor familyzf-C2H2 · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12874
all species →
zf-metZinc-finger of C2H2 typeDomainInterproscan
PF12171
all species →
zf-C2H2_jazZinc-finger double-stranded RNA-bindingFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR052644
all species →
FamilyZinc finger matrin-type protein 3Interproscan
IPR013087
all species →
DomainZinc finger C2H2-typeInterproscan
IPR022755
all species →
DomainZinc finger, double-stranded RNA bindingInterproscan
IPR036236
all species →
Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR003604
all species →
DomainMatrin/U1-C-like, C2H2-type zinc fingerInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46786
all species →
ZINC FINGER MATRIN-TYPE PROTEIN 3Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003676
all species →
Molecular Functionnucleic acid bindingInterproscan
GO:0008270
all species →
Molecular Functionzinc ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for Csp0G305380.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP