Gene detail

Detailed information of Csp0G306540 in Chrysogorgia sp. JL179-B06

Genomic Location: Contig00576:389690...422850
NR annotation: no NCBI-NR hit recorded
Species Chrysogorgia sp. JL179-B06 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004926 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09759 all species →	Atx10homo_assoc	Spinocerebellar ataxia type 10 protein domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR051374 all species →	Family	Ataxin-10 and Copper transport protein 86 families	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR019156 all species →	Domain	Ataxin-10 domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13255 all species →	ATAXIN-10	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0031175 all species →	Biological Process	neuron projection development	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K19323	ATXN10; ataxin-10	-	Spinocerebellar ataxia	ko05017	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.