Gene detail

Detailed information of Csp0G314850 in Chrysogorgia sp. JL179-B06

Genomic Location: Contig00600:1038962...1076483
NR annotation: no NCBI-NR hit recorded
Species Chrysogorgia sp. JL179-B06 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Csp0G314850

ATGAAATTCAAGAAACTTCCGTTGACTCGAGGAGGGATAAGTGAAGGATCGTACAGCAGACGGGGAAGTCGCGACTCTCGCTCGATGCTCAGAGAGCAATCGGATTCAAATCTTAAGTACAACGATGTCGATGGCTTAAAGTCGGAAATAAGGAGGCAGCTTAAAATCAAAGAGGGAGCCGAGAACTTTAAGAAAGCCACGACCGACAAGAAATCCTTAACGCAATGCCATTCGATTTTGAAGGAAGCAAACTCGAAGCTCCAGGAATTGCATCACCAATTGCAGGACTTGAATGCTGGGTTTACAGAAAACTCAACAGAGCAAGATGATGCTTTTTCCCCCGAGAGAAATCACCATAATCACGAGGTACATGTAAAACATGTAAAACAAATGGCGATTGAAATGAAGGTGCGTCAAGGGGCTGAGAACATGCTACAGATGTACAGCTCTGGTTCATCAAAAGACAAAAAAATTTACGCAGAAGCACAGCAAATGCTTGACGACTCCAAAGTCAAGATAGACTTTTTGAAAATGGCGATCCTTCGCGAACAGCAGCAGCACAACTCCGAGTGTGAGGAAAACAAGTCTAGCAAATCCGTTGCTCCGAAGATGTCGCCATTGCAGTGCAGGATAGAGGAAATTCGGCACCACATAGAGATCGAGTCTCGGGTCATTGATGGGTTGAAAAACATGAAGAGACTTTTGCAAGAGAAACAAGATAAGAAAGCAACCCAAGAGACAGAGAAAAAGTTATACGAATCAAAGCAGAAATTGGACCTGCTTCAGAATTCCCTGCAGAAACGAATGGGACAGCTATCTCCAAAGCAAGCAGCTGTTGGCATTTACCAAGAGAACTTTGGACCATTACAAACTTCCAGTGGGTCTTTCAGTGGTGATCTTTATGCGACCTTACCTAAACCTGCAGCATTAACAGGGAAACTCATTGTGATGCTACAAGGTGTGGAGGACTTACTGGAATTTGTGCCAAACAGAGATCCAAGACGAGGATCAATTCACGCAGTTTTTAGTCCTGAAAATAAATTCATGAATCGCATGAGCAAAAAAGGAAGCTCTACACATCTAGAAAGCCAGTCAAGTATGTTGTATGAAATTTGTGCAATTTTGAAGCTAGATAGTACTTATACGAACCAGACGAATTGGAAGCCATTTGGCGAAGCCGCTTGGGAACAAGAGTTTCGAATAGACTTAGAAAGGTCTCGAGAGTTAGAAATAGGAGTTTACTGGCGGGACTACAGAGCCATGTGTGGTGTTCTGTTTCTGAGACTTGAAGAGTTCCTTGATAATAGAACACACGAAATATCAGTTCCACTGGAGCCTCAAGGGAAAGTTATCGGAACTGTCACCTTCGTTAATCCAATGGTTAGTCGAAAACCCAAGCTACAGCGACAGAAGAAGATCTTTAAGATCAACAGAGGTAAACACTTTCTGCGGGCAGGACAGATGAATACCAATGTAGCTACATGGGCACGTCTCTTAAAAAGAGCTACTCCACAAAATTGTCAAACAACCTCCGCTACCTTAAGTCCTGGTACTACAGGGACGTATTCGTCTGCTGGCGATCTGTTCGTTGATCGAGTAAAGCCCCCACCACCGCCCGAAGAAAAACAGCAAAGATCAAAAACAATGCCGCAGAAAATGGCTTCACCGAAACCAGTAAAAACAAACAATTCTGAAGAACAGGACGCTTTATCAGCGTTTGGTTTCTTGGATAGTCCTATGTCAAATTACCAAAGAGATTATCACCCCCCTCCAGAATCACCGTCATTAATCCCTCGAAAACAAAACAACGCAAGAGAGAGACCCAAGGAAACCTCGCCAGTATCATCTACGATGAACATGAAGAACTTTAGATGCGTGAGCGTCCTGGGACGAGGACATTTCGGAAAGGTGATCCTGGCGGAATACAAAAACACTCGAGAGTTATTTGCCATCAAAGCATTAAAAAAGGCTGATATCATATCAAGAGACGAAGTCGAAAGCTTGCAATCTGAAAAAAGAATATTTCTCGCTGCCAATAAAACACGACATCCCTTCCTGGTCAATTTGTTTGCCTGTTATCAAACAAAGGGTCATGTATGTTTTGTGATGGAGTACGCCTCGGGCGGGGATCTGATGATGCATATTCACAATGAAGTGTTTTCAGAGCCAAGAGCCGTGTTTTATACATCTTGTGTCGTCCTTGGACTGGAATATTTACACGAACATGAAATTGTCTACAGAGATTTGAAACTCGATAATCTGCTACTGGACGCCGAAGGCTATGTCAAAATTGCAGACTTTGGACTGTGTAAGGAAGGCATGGGTCATGGGGAGAGGACAGGTACCTTCTGTGGGACACCGGAGTTTTTAGCACCTGAGGTACTCACTGAGACGTCATACACGCGTTCAGTTGACTGGTGGGGCTTGGGCGTTCTTATATTTGAAATGCTTGTTGGTGAGTCCCCGTTTCCAGGAGACGACGAGGAAGAGGTGTTTGATTCTATTGTCAACGACGAAGTTCGCTATCCCAGGTTCTTGTCGGCGGTGGCTGTGGCAATAATGAGAAGGTTATTACGAAGGAATCCAGAGCGGAGGCTTGGAGCAAGCGAAAATGACGCTGAGGACGTGAAAAAACAGGGTTTCTTTAAGGATGTAAGGTGGGAGGATTTGTTGGCTCGTAAAGTGAAACCACCATTTGTGCCAACTTTGAAACATGCAGAGGATGTAAGTAATTTTGACGAGGAGTTCACATCTGAAGATCCAGTCCTAACGCCACCGAAAGAACCACGACCTCTTGACGTGGAAGAACAGCCCGTTGAAGGCGTTCCTTGGTCGATCGCTGATTGTCGACTGACGACGCGTCCCGTACGAGACAAGCAACACTGA

Transcript

Csp0G314850

Protein

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002719 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan
PF00433 all species →	Pkinase_C	Protein kinase C terminal domain	Family	Interproscan
PF02185 all species →	HR1	Hr1 repeat	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011072 all species →	Domain	HR1 rho-binding domain	Interproscan
IPR036274 all species →	Homologous_superfamily	HR1 repeat superfamily	Interproscan
IPR000961 all species →	Domain	AGC-kinase, C-terminal	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR035892 all species →	Homologous_superfamily	C2 domain superfamily	Interproscan
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR037313 all species →	Domain	Serine/threonine-protein kinase N, first HR1 domain	Interproscan
IPR017892 all species →	Domain	Protein kinase, C-terminal	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24351 all species →	RIBOSOMAL PROTEIN S6 KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0007165 all species →	Biological Process	signal transduction	Interproscan
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0031267 all species →	Molecular Function	small GTPase binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for Csp0G314850.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.