Gene detail

Detailed information of Csp0G318070 in Chrysogorgia sp. JL179-B06

Genomic Location: Contig00611:297045...333221
NR annotation: no NCBI-NR hit recorded
Species Chrysogorgia sp. JL179-B06 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Csp0G318070

ATGCACGCAGTACAACGACCAGTTCATATGGAATTGGAACCACCATCACATATCGCTGGTCCATTAAATGGAAACCCGTATGCAACTGTCGACCATGCCATGAAGATGAAGTGTCGAGCGAGCGAAGAGCAGAACGGCAGAGATTCGGATTATCCAGGCGAGAAGAAAATGGCGAAGTACAACGGGGACAATCTGGTCTTTCAATTCCCCAGAGTGATCGGCGAAAAGCAAATGCGAGCAGAGAATCGCAACGAGGCGATGAACGAGTTACTTGGAAACCTAGGTGTCGACTCTAAATCGATCACAGCAGTTACCCAAAACGACAAAGAGGTGACGGTGAGAATCACCAGTTCGGGGGGGAATGTCGCCAAGAACCCGAAGCCACCGCAAAGGGAAAGTAGTTTCAAAGCTACAAAGAGACTTAGCGGAAAAGGAGTGAGAACGGGCACAGCGCAGCAATTGCCCACGAAACCATCCCCAAGTACTTCTCCCAGTTCTCCGATAGAAGTCCCCATGGTGCAGACTGCACCTGACGGTGACCAAAACGTTTACTACGCCTCGCACTACGCGGCATCTCAGCCAGGCAAAGTCAAGGCTAAACTACATATAGACCCGCAGTCGATGGGACACGTTTCTCCAACGGCCTCTCCCGAACTTATATCCAATAGAAGATTACTGCTGGATGTTATCGAAGGAGAGGATTCTGATGAGAAGGAATTTGCCGCGGAGTCGTCGGCGTTGAGGAACGATTGTACAGATTCGGAATCCGAGGAGGAAATAACATATCACGATAGTCCGACTCTGCCGAGGCGCGGTAATGTGGCAGCGAAAGTACAGTTCCTCAGCAAGACTATGGCTTTCTTACCGCCCAAGGAATCGCCCGAGACGAATAAACACAAGAATACTTCGGTGCCGATGATCGGACTCACGCATCTCGCGGCGACGGAGGTTTCCGACCGCATCGCGAAGCACAACGAGAAGTCGCTGGCTGCCGGGCAAGTGATGTCGACGGCAAACATGGTCCTTTATAGCAGCAAACAGCCGCCGAAGAAAGTGGTTGAATACCATCCTAATCAACACCATGACACGAACGAACAAGAGGAAGACTTCAGGAGTGCCTCAGTTTTACGTCATCGCCAAGAAGGTTGGAATAAGGTTGAAATCAACGAATCCGACTCCAGTGACGTCATTTCAGATCATGTCGAGGAGGAGGAGGAGGAGGAGCAGGAGGACTTCCCACCACCCCCTCCGCCACTTCCAACACCACCTGTGGTGAAGACCATTAGACTTGGCGAAGAGGCGGAATTTCGACTAAACATTCAAGTTTCAGACACAGGAAAGCATATTCCATCGCCGACGAGCGATGGCCACGTTGATTCTGGTTACGAAGACGTCGCTACGTCCACCCCAGTTGCAGTACATCATATTAAAGTCGTCGAACCTGCTGTCCAGAAATTATCGGTTCATGTAGAGGAGTCCGTCAGCGAAGACCTACTAAATGAACTTTTTATGAATGGAAACGAAGATGACCACGCCGTAACAGTTGAGCAGAAGGAGAAGGTAAGCCTGCATGGGCATGGGGGTATTATTGACATCACTGTGTCATTTCATTTGAAGGAGCGTACATCGAATGACAAAGTCACAGTGGTGATTAAGCGACCAGACTCCGAGGAACAACGACACGCCGACGAAGATGAATCTGGTGGGTACGCAAGGATAGAAGACATCACTCCGGGTAAAGGCCAAGAAGACACCGAGCTTAATTACGTGAAAGAAAACGGAATGACAGATGAAGAATTTTTAAACAGTTATACAATAATACCAACAAAGGATGCAGTCCAAGAGATGGTGGTTCAAGAAGATATTCAGGAGGTTGAACCAAAGCACACGAAAAAGGTTAAACAATCTCCAGAGGAAAGAGGACCTGCTATCCTGAATGAACTCATCAACGGCATTCGAACCATGAAGCAAGAAATGTCCTACAAAGCCAAAGAACAGTCAGAGTTAGAATCAGCTGTATTCCCAACAAGTCCAGTGAGCGATAAATCTAATTCACCTACAATGCCGCTATCACCCACTTCAACTCTATCAAGAGGGAAACGAAGGCGCAGGAAGACATCAGACAAAGGCTATAGCTCAACTAATTCAAGCTTATCAGAATCAGAACTTTTTGTGGAAATTCCAAGGGATTCAAGTGTGAAGTTTGATAAAGATACTTCAGCATATTGGTATAAACCACATATAACAAGGGAACAAGCCATAGCATTGTTGCAAGATAAATCACCTGGGACATTTGTCATACGCGATAGCCAGTCCTATACTGGTGCCTTTGGACTGGCAATCAAAGTAGAGGTTCCACCAATACATGTGATACAAAATCAAACAAAAGATTTTGATAATATTGACCCATCTGAATTTGTACGTCATTTATTGATTGAGTCAACACCAAAGGGAGTCCATCTCAAGGATTGCAAAGATGAACCATTGTTTGGGAGTTTGGCAGCCTTCGTGTATCAGCATTCTTTAACAGAAATCTCGCTTCCATGTAAGCTTATATTGCCAACAAAAGATTTGACAGTTGGAACCTTAAAGATCACTGACAGACAGGAAACTGAAACTCAGCTCTTAGCACAAGGGGCTGCTTGTAATGTTGCTTATCTTGGTACATTTAATGTGGAGTCCCTGACTGGTACAGCAGCCTTGCAATATGCTGTGGCAAAAATTGAACCTGGTCGAACAAATAAAGCACAAGAGCCGGTACTGGTTAACTTTAAAGTTAACAGACAAGGGATCACATTGACAGATAATGAACGAAAACTTTTCTTCAGAAAACACTATCCTTTAAAAAATATACTTTATTGGGGAACAGATCCTGACGATACAAGATGGGACTTAACAGAATATGGAGGTGGAAATATGGCAAGATCCTTTGTGTTTGTGTCAAGAAAAGTCGATAGTGATGGAAACGAATGTCATCTGTTTGGCGAGATGGACCCTAAACAACCAGCTTCAACTGTCGTCGATGTTATCACCAAGATAATTTCAAATGTGAATTCATGA

Transcript

Csp0G318070

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00017 all species →	SH2	SH2 domain	Domain	Interproscan
PF08416 all species →	PTB	Phosphotyrosine-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000980 all species →	Domain	SH2 domain	Interproscan
IPR051484 all species →	Family	Tensin Phosphatase	Interproscan
IPR006020 all species →	Domain	PTB/PI domain	Interproscan
IPR013625 all species →	Domain	Tensin/EPS8 phosphotyrosine-binding domain	Interproscan
IPR033929 all species →	Domain	Tensin, phosphotyrosine-binding domain	Interproscan
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR036860 all species →	Homologous_superfamily	SH2 domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45734 all species →	TENSIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005925 all species →	Cellular Component	focal adhesion	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K18080	TNS; tensin	-	Protein phosphatases and associated proteins	ko01009	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.