Detailed information of Csp0G318840 in Chrysogorgia sp. JL179-B06

Genomic Location: Contig00611:1264478...1266211
NR annotation: no NCBI-NR hit recorded
Species Chrysogorgia sp. JL179-B06 · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Ubiquitin familyE3|E3 activity RING|U-box · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13923
all species →
zf-C3HC4_2Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF01344
all species →
Kelch_1Kelch motifRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001293
all species →
DomainZinc finger, TRAF-typeInterproscan
IPR013083
all species →
Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR006652
all species →
RepeatKelch repeat type 1Interproscan
IPR015915
all species →
Homologous_superfamilyKelch-type beta propellerInterproscan
IPR001841
all species →
DomainZinc finger, RING-typeInterproscan
IPR051746
all species →
FamilyKelch domain-containing protein 8Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46260
all species →
RING-TYPE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008270
all species →
Molecular Functionzinc ion bindingInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for Csp0G318840.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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