Gene detail

Detailed information of Csp0G322020 in Chrysogorgia sp. JL179-B06

Genomic Location: Contig00613:896114...931039
NR annotation: no NCBI-NR hit recorded
Species Chrysogorgia sp. JL179-B06 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Csp0G322020

ATGACGTACATATCCTACTTCCCTGAAGCTAAAAGCAAGTCCGGTGCACCTCATCGTCCAAATTTACCTGCTGCAGCCAAGTGCTATGCGGAAGGGCCTGGACTTGCTCCCGATAGCCTTGTTGCAAAACAGTCCACTCAGTTTAAGGTGTTCACACAAGGTGCTGGCAAAGGAGAACCTCAGGTGTCTGTGTTCGGACCAGGACGCAAGAGTGTATCATGTGAAGTTGTGGATAATGGTGACAAAACATTTTCTTATGAATATAGTCCACCTGAACCAGGTATATATGATGTGCATATCAAGTGGAAGGGAAGACACATTCCAAAAAGTCCATTCCGTGTTAAGGTGTCGACAGATTTAGATCCCGCCAAATGTTATGCTGAGGGACCTGGACTTGAATCAGGAATTGTGGAAAAGCAATGGACCTACTTCACAGTTTACACCATAGGTGCTGGTCAAGGAAAACTCCAAGTAGATATCATTGACCCACATCTGAGTAAAAATATTGAGATGAAGGTCGAAGATAAGGGTGATGGTACGTATTACATAGAGTATAAACCAGCGTCGTATGGCAAGCACACCATCAACATCAAGTTTGGAGGAAGCCATATTGCCAAGAGCCCATACCATGTTAATGTTGTGTCTTCTAAGAAAGAAGCAATCGCAACCAAAGTAAAAGCTTATGGACCAGGTCTAGAGCTGAAGGGAGTCCAAACAAAAGTAGAAGCCATCTTTACAGTTGATGGCAAAGATGCTGGTGATGGTGTTCTGAAAGTGCATATTAAGGGCCCTAAAGGTGAAGTGCCTTGCGACATTACGGATAATGGTGATGGAACATATACTTGTACCTATACTGCAGTGTTTGAAGGACGCCATGTTATCACTATAACCTGGAGTGGAAAGTCCATTCCCAAGAGTCCTTACAAGATTGAAGTGTCTCCGTACATTGATATCACGAAGATCAAGGCGTATGGTCCAGGTCTGGAGAAAGGTGTTGCTGGCCAACCATGTACGTTTACTGTGGAAACAACTGGCGCTGGTATCGATAGCTTAGGATTCGCCGTGGAAGGTCCCCATCAAGCTGAGATCAAGTGTAAAGATCTTGGGAATGGAAAATGCGAGGTCACCTACTTTCCCACCAAACCTGGGGAATATACTGTGCATGTGACCTGTAATGAACAAGATATCCCTCAGAGTCCGTTCACTGTCCCCATTACCCCTGGTGGTGATGCTAGTAAATGTTACGCTGAAGGACCTGGCTTGGAGCCTAATGGTGTTGTTGCAGGAACCCCTGCCGAATTCACTGTTTTCACGAAAGGCGCAGGTGTCGGTGAGGTCGAGGTGACGGCGAAGGACGACAAAGGACGAAGTATCGAAGTAGAGATTCTTGACAACAAAGATGGCACCACATCGGTGGTCTACCATCCCGACAAGCCTGGTAAATACACGGTTACCATTATCTTCAATGGTAAACCCATCCCAAAGAGTCCATTCAAGATCAACGTTGCGCTCAACAATCCTGCCAAATGCAAAGCATATGGACCAGCCAGGTTCACCATCGAGACGAAAGGGGCGGGCGAAGGTGGTCTGGGGCTAACAATCGAGGGACCAACCGAGACAAAGATAGAATGCAAGGACAACGGCGATGGATCCTGCGATGTCGTGTACTACCCTGTAGAACCCGGTGATCACACGATTAATATCTTGTATGCGGATAAACACATTCCCGGTAGCCCATTTAAGGCGAAGGCCTCGTACCCTGTGGATGCCTCTAAAGTAATAATCAGTGGTCCAGGTTTGGAGCCTGGTGTCAAAGCTGGTCTGCCAGCTGACATCGACATCGACGCAACCAAGGCCGGAGATGCGCCTCTTGAGATAGAGGTTCTCAACCCTCAGAACAAGAAGGTTAAGGTGGACTTGGACGAAGAAGAACCAGGGATATATGCAGCGACGTATTACCCAGAGAAACCAGGCAAATATACGGTCAACGTCAAATATGGCGGCAAACACGTGCCCAAAAGTCCTCTGAAAATCGACGTTAAACCAAAAGGCGATGCAAGCAAGTGTAAGCTCGCCGGGCCTGGGTTGGAAAGTCCGGTCGTCAACGAACCGACGTCTTTCGATGTGGATTGTAAAAAAGCAGGCGAAGGCGAACTCGTGCCATCCGTGGTCAGTCCATCGGGCGAGCAAGTCGACACCAATGTCAAAGACAATGGCGATGGCACTTACACCGTAGGGTACACTCCTACCGAGGACGGACCTCACACCGTAGATGTCAAATACGACGGGGACTCGATACCCGGCACCCCTGCCCAAGTCGACGTTCTCCCTAAGACCGACACTGGTAAAGTTAAAGCTTACGGCCCCGGTCTTGAGAGCGCCCTTACCGGACAAAAATCCCAATTCACCGTGGACACACGGGAAGCTGGCCCTGGAGGTTTGAGCCTAGCGGTGGAAGGTCCCGCCGAGGCGAAGTTGGTGTGTAAGGACAACAAAGACGGCACGTGCTCAGCGACTTACATTGCTCAGGAACCGGGCGAGTACGATGTCCACGTGAAGTACGCCGACGAACACGTACCCGGTAGCCCGTTCAAGGTGAAGGCCACGCGGCCCGTGGATGCGAGCAAGGTGAAATGCTCGGGCCCCGGTGTTGATAAGGCGCCGCTCTTTGAAGGAGCTCCAACTCACTTCACGGTGGATACGAAGGAAGCGGGCGATGCCCCCCTGGATGTGTCTATCGAAACTCCAGATAAGAAAAAGATCAAACCGGATGAAGTGACCAAAGTGGATGACGACACGTACGAAGTGAAATACACTGCGCCCAAAGAAGGTCGTTACGCCGTGGATGTAAAGTATGGTGATAAACCAGTTCCCAACAGTCCATTCCGTGTTCGCTGCGGCCCACCGTATGACGCAAGCAAGGTGAAGGTCAGCGGGCCAGCCGTCCAAAAGACAGGAGTTGTGGCGGAAGAAATAACGAAAGCCATCGTCGATACAACCGAAGCAGGAATCGCTGATCTTTCAGCTCTCCTCGAGACCCCGTCTGGCGAGACCATTGAACCAACCATCACACCGCTGGACAATGGCAAGTATGAGATCGCGTACGAACCGACGGAGGTTGGTAACCACAAGCTGAACGTGAAATATGGAAAGGACCAAGTTAAAGATAGTCCGTTCCGTGTTAAGGTGGCACCTGCTGGTGACGCGAGTAAAGTAAAAGTGAGCGGAGAGGGGATTAAAAAACCTCGCGTGGGTCAACTGGTGGATATCATATTCGATACCAGTGAAGCAGGCAAAGGACGTCCACGTTGCTCCATCAAATCTCCGTCCGGCAAAGACGTCCCGGTAGAAATAATCGACAATGGAGACAACACCTACACCTGCAAGTGGACGCCGGTCGAGGAAGGCATACACGACGTGGACGTGGTATACGGTGGTGAACCTGTCCGTGGCAGTCCCTTCAAGGTGAAAGCCGTGAAGGCCCCGGAGATTGAGAAAATCAAAGCAAACGTCATGGAGGAAGTCCAGGCAGCGAATCCCTGCGTCGACCAGCCATTGGAGTTCGGGGTCGACACGCGAGATGCCGAACAGGATAGCGGGAAGGGCACGTTGTCGGCGTCGATCATCACGCCAAACGGAAAGACAGAATACCCTGATGTGCGCGCCAACTTGGATGATACTTACGCGGTGACGTATACCCCGAAAGAGCCTGGGATCTACTCGCTGGGCATCAACTATGACGATGAACCGATCCCCGGTAGTCCGTTCCAGTTTGAGGTCGTGGAAGGCGGGCCAGAGCGTGTCATTGCTTTCGGAAAAGGCCTGGAGCGAGGAATCATGGAAGAACCGTGCGAATTCACCGTCGTCACAAAGGATGCTGGACCTGGTGGTCTGTCCCTCGCCGTCGAAGGACCAAGCAAGGCCGAGATCCAATGTGTGGATAATGGCGATGGGTCCTGCTCCGTCTCTTATGTCCCCAAAGAACCAGGCGAGTACAACGTCGTAGTTAAATTCGCAGACCAACACATCCCCGGCAGTCCATTCACAGCCGAAGTATTCCCGAAAGGTACCGACTTCGCCGACCACGTCAAGCGTGAACGGCCGGTGGTTGGCAAGCCATGTGACGTCAAACTTGATATCCCGGATGTGGACGTGGAGCGCGACTTTGAACATTTGGCAGGGACATTGAAAAGGCCTAACAGTGATAAGGAAGAACCGACAGAGTTGAGGAAGAACCCCGACGGAACCCTTGGAGTAACATTCACGCCATACGAACCAGGCGAGCACCTCATCAGCATCAAGAAGAGAGGAAAGCACGTGCAGAACAGCCCATTCTCCGTCATGGTCCAAGCGCCGCGTCTTGGAGATCTGTACCCCGCCGGTCGTCCGGCCGAAGTAGACCTTAGCGCCATAAAGGGCGTGAATCCCGAAGACTTCGACAGACTCACGGCGACTCTGCGTCGACCGAAGAGCAAAGTCGAAGAAAGCGTCAACCTCATGCGCTACCCTGACGGTGGCATCGGCGTGTCCTTCGTGCCGCGGGAACCTGGGGAACACTTCTTGACGATCAAGAAAGACGGCCACGCTATCCCCGGAAGTCCCTTCTCGATCCTCGTCGAATCCGAGGAGCCGGTGAACGCCGCGGGAGCGCCCGTGGATACCTGCTTGGACCTCCCTGGCGTCAACCTACCTGAGGATTTCAAGAAGCTCAAGGGAACCCTCAAGAGACCCTCATCGTCCACCGAAGAACCCCTGCGTCTCGTGCTAAACTCCGATAATTCCCTCTCGTGCTCCTTTATCCCTAAGGAAACCGGGAAACATCTCGTTGGGGTGAAAAAGTTCAACCGCCACGTGAACGGAAGTCCGATCCCGGTTATGGTCACGTCCCCGGAGCCGGTGAACCGCGTCGAACTGCCGTGCGGCGTTGCGCTCGAGAACGTTTCACCGGAAGACCTGCCTAGGTTGGAGGCTGGAATCCAGAGACCTGGGTCCCAAATCGAAGAACCAGTTAGGATAAAGCAAAACTCGGACGATACTCTGTCGGCTTCGTTTTTCCCTCACGAAGAAGGACCGCACAAGTTACATGTGCGAAAAGACAAGAAACCATTGCCAGAAAGTCCATACTTAATCGACGTTCTTGGAAAGGATAAGACGTTCCTGGAAAAAGATGCCAAAGATAAAGTTCCGGTTGAAGAAGTACATCCGGTTGGACGTACCTGTGACGTGGGTCTTGATATCCCAGGAGTAGTTTTGCCAGATGATTTCAAAAAACTGACAGCGACACTTCAAAGACCGAACAACAAAAAAGAAGAACCTGTAACTCTGGAGCTTAATCCCGACAACACACTGGGTATTTCCTTTGTTCCTACAGAGCCTGGCGAGCATTTCGTTCGCGTGAAGAAATCTGGCGAAGACGTTCCAGGCAGTCCCTTCTCCATCATGGTAGAAGCCGCTGAAGCCGTGAACGCGGTCGGCAGACCTTGTGATTGCCACCTCGATATCCCTGGCCTCAACCTTCCAGCAGACCTCACCAAAGTCAAGACGACCTTGAAGAGACCCGACTCCAACGAAGAAGAACCCGTGAAACTGAAAATATTGTCCGACAATACCCTCAGTGTCTCGTTTGTCCCCAGGTCACCCGGCGAACACCTGATCAGCGTGAAGAAGTTCAACCGTCACTTGAGCGGCAGTCCGTTCTCCGTCATGGTAACCGCGTCTGAAACCGCGAGTCAGTCCGTGGGACGACCCTGTGGACTGGGGCTGGAGATTCCGGGCTTGAAGTTGCCCGAAGACTTCGACCTGCTCTCGGCCGTGCTCAAGAGGCCTGGTAGCGCTTCCGAGGAACCCTTGAAGATCGTCCTCAATTCCGATAACACTCTCAGCGTCTCGTTTATCCCCAAGGAAACAGGCGAACACCTGATTAGTGTGTTCAAGAACAAACGTCACGTGACTGGGAGCCCGTTCTCTGTGGTGGTCAGCGGTCCTGGACCAGCTGATGCCACCAAAGTGAAAGCTTACGGAAAAGGTCTCGAGTCTGGCGTTGTTGGAGATAAGGCGGAATTCACCGTGAATACCCGCGATGCTGGTTACGGCGGCCTGGGACTGTCCATCGAAGGACCATCGAAAGCTGAAATTAGTTGTGTCGACAACGAAGATGGCACGTGCACCGTGGACTACGTACCAGCGGAGCCTGGGGACTACGTCATCCACGTGCGCTTCGCTGACGACGAAATCCCAGGAAGTCCGTTCACGTGCGTTGTTGCCCCTGGCGACAAATCCGGCCGTCGACCGATCGTGGAAGAGGGCATCACCAGGAGGACCTCGCAACTGCTGGACGACCTCGTGTCATTCAGCCCGCAACAACCTCACGACTTCATGCTCGATCTCCAAGGTTACGACGTGAAGAACTTGAAGGCGACAGTCGAGACGCCGTCGGGAAAAACTGAGCCCGCGGAAATCGTGGAAAGCGCCAAGGACACGTACACGATCCGGTTTGTCACGAAAGAAGGAGGGCTGTACAAGGTGAGCGTGAAGAACCGCTCGCGACACATCCCAGGCAGTCCATTCCAAGTCAAGGTCGACGCACCCAAGTGGGGTGGCGCGCCGAAGTGTTCCGCAGCGGGACCTGGGTTAGAGCGAGGTGTAGTCAACCAAGCGGCCCACTTCACCGTGTGGACACGTGATGCCGGCCCAGGAGGCTTAGCGGTCGCCATCGAAGGCCCAGCTAAAACCGAGATCAACTGTAAAGACAACGGAGACGGTTCGTGTAGCATCAGCTACGTTCCGACCGAGCCCGGCGAGTACACCGTGCACGTCCGATTTGCCGACGAGAACATCCCGGCTGCGCCGTTCAAGGTGTTCGTGACGGCGGAAGAGGACGAACGTTTCCGAGACCTCAATGTGTCGGATATAGTTGAAGGTGGCATTGCCGTTGGCCAACCAGCATCGTTCTCCGTGGAAACGAACGGCCCCGTAGGAGAAGTCACCGCTTCCGTCCTCGCTCCGTCCGGAGCCGAGGGTCCTGCGACCATTTCCGATCGTGGCAATGGCAGCTACGCCATCCGATTTGTCCCGAACGAGGTCGGTGACCACCTGATCAGCGTGCGCTTCGACGGTGTTCACATCCCCGGCAGTCCGTTCAAGGTCAAGGTCGGCGGTGGGGAAAGTTACCCAGGGAAAGTGAAGGCCTTCGGGCCTGGATTGGAAGGTGGTGTTGTGGGTCAGGAGACGCACTTCACGGTGGACGCTTTGAGGGCTGGGACTGGCGCGTTGTCACTGTCCGTCGATGGACCGGCGAAGGTTCGCATGAACTGTACGGAGAATCCCGATGGCACATACCGCGTCACGTACCATCCGTTGATCGCGGGCGACTACAAGATCACGATCAAGTTTGCCGACGAAAACATTCCCAGGAGTCCATACAACGTGACCATCCGCGATGGATTCTCGGGAAATGCCGAGAAGTGTACGTCCGTCGGCTCGGGTCTTCATCGTGCCGTGATCGGCGAACCGAACGTCTTCACCGTCAACTGCAGTGATGCCGGACGGGGATCGCTTATGGTGGGGGTCGAAGGTCCGGCCATACCCGCGAAAGAAATCAAAATCAAGCATACCGGAGGAAAGGTCTACGCGGTAAACTACACGCTCGAAGAACCCGGAGAATACGTCCTGAAAGTGCTCTGGGGGGAGAAACACATCCCCGGAAGTCCGTTCCATGTTACCGTTTGA

Transcript

Csp0G322020

Protein

Csp0G322020

MTYISYFPEAKSKSGAPHRPNLPAAAKCYAEGPGLAPDSLVAKQSTQFKVFTQGAGKGEPQVSVFGPGRKSVSCEVVDNGDKTFSYEYSPPEPGIYDVHIKWKGRHIPKSPFRVKVSTDLDPAKCYAEGPGLESGIVEKQWTYFTVYTIGAGQGKLQVDIIDPHLSKNIEMKVEDKGDGTYYIEYKPASYGKHTINIKFGGSHIAKSPYHVNVVSSKKEAIATKVKAYGPGLELKGVQTKVEAIFTVDGKDAGDGVLKVHIKGPKGEVPCDITDNGDGTYTCTYTAVFEGRHVITITWSGKSIPKSPYKIEVSPYIDITKIKAYGPGLEKGVAGQPCTFTVETTGAGIDSLGFAVEGPHQAEIKCKDLGNGKCEVTYFPTKPGEYTVHVTCNEQDIPQSPFTVPITPGGDASKCYAEGPGLEPNGVVAGTPAEFTVFTKGAGVGEVEVTAKDDKGRSIEVEILDNKDGTTSVVYHPDKPGKYTVTIIFNGKPIPKSPFKINVALNNPAKCKAYGPARFTIETKGAGEGGLGLTIEGPTETKIECKDNGDGSCDVVYYPVEPGDHTINILYADKHIPGSPFKAKASYPVDASKVIISGPGLEPGVKAGLPADIDIDATKAGDAPLEIEVLNPQNKKVKVDLDEEEPGIYAATYYPEKPGKYTVNVKYGGKHVPKSPLKIDVKPKGDASKCKLAGPGLESPVVNEPTSFDVDCKKAGEGELVPSVVSPSGEQVDTNVKDNGDGTYTVGYTPTEDGPHTVDVKYDGDSIPGTPAQVDVLPKTDTGKVKAYGPGLESALTGQKSQFTVDTREAGPGGLSLAVEGPAEAKLVCKDNKDGTCSATYIAQEPGEYDVHVKYADEHVPGSPFKVKATRPVDASKVKCSGPGVDKAPLFEGAPTHFTVDTKEAGDAPLDVSIETPDKKKIKPDEVTKVDDDTYEVKYTAPKEGRYAVDVKYGDKPVPNSPFRVRCGPPYDASKVKVSGPAVQKTGVVAEEITKAIVDTTEAGIADLSALLETPSGETIEPTITPLDNGKYEIAYEPTEVGNHKLNVKYGKDQVKDSPFRVKVAPAGDASKVKVSGEGIKKPRVGQLVDIIFDTSEAGKGRPRCSIKSPSGKDVPVEIIDNGDNTYTCKWTPVEEGIHDVDVVYGGEPVRGSPFKVKAVKAPEIEKIKANVMEEVQAANPCVDQPLEFGVDTRDAEQDSGKGTLSASIITPNGKTEYPDVRANLDDTYAVTYTPKEPGIYSLGINYDDEPIPGSPFQFEVVEGGPERVIAFGKGLERGIMEEPCEFTVVTKDAGPGGLSLAVEGPSKAEIQCVDNGDGSCSVSYVPKEPGEYNVVVKFADQHIPGSPFTAEVFPKGTDFADHVKRERPVVGKPCDVKLDIPDVDVERDFEHLAGTLKRPNSDKEEPTELRKNPDGTLGVTFTPYEPGEHLISIKKRGKHVQNSPFSVMVQAPRLGDLYPAGRPAEVDLSAIKGVNPEDFDRLTATLRRPKSKVEESVNLMRYPDGGIGVSFVPREPGEHFLTIKKDGHAIPGSPFSILVESEEPVNAAGAPVDTCLDLPGVNLPEDFKKLKGTLKRPSSSTEEPLRLVLNSDNSLSCSFIPKETGKHLVGVKKFNRHVNGSPIPVMVTSPEPVNRVELPCGVALENVSPEDLPRLEAGIQRPGSQIEEPVRIKQNSDDTLSASFFPHEEGPHKLHVRKDKKPLPESPYLIDVLGKDKTFLEKDAKDKVPVEEVHPVGRTCDVGLDIPGVVLPDDFKKLTATLQRPNNKKEEPVTLELNPDNTLGISFVPTEPGEHFVRVKKSGEDVPGSPFSIMVEAAEAVNAVGRPCDCHLDIPGLNLPADLTKVKTTLKRPDSNEEEPVKLKILSDNTLSVSFVPRSPGEHLISVKKFNRHLSGSPFSVMVTASETASQSVGRPCGLGLEIPGLKLPEDFDLLSAVLKRPGSASEEPLKIVLNSDNTLSVSFIPKETGEHLISVFKNKRHVTGSPFSVVVSGPGPADATKVKAYGKGLESGVVGDKAEFTVNTRDAGYGGLGLSIEGPSKAEISCVDNEDGTCTVDYVPAEPGDYVIHVRFADDEIPGSPFTCVVAPGDKSGRRPIVEEGITRRTSQLLDDLVSFSPQQPHDFMLDLQGYDVKNLKATVETPSGKTEPAEIVESAKDTYTIRFVTKEGGLYKVSVKNRSRHIPGSPFQVKVDAPKWGGAPKCSAAGPGLERGVVNQAAHFTVWTRDAGPGGLAVAIEGPAKTEINCKDNGDGSCSISYVPTEPGEYTVHVRFADENIPAAPFKVFVTAEEDERFRDLNVSDIVEGGIAVGQPASFSVETNGPVGEVTASVLAPSGAEGPATISDRGNGSYAIRFVPNEVGDHLISVRFDGVHIPGSPFKVKVGGGESYPGKVKAFGPGLEGGVVGQETHFTVDALRAGTGALSLSVDGPAKVRMNCTENPDGTYRVTYHPLIAGDYKITIKFADENIPRSPYNVTIRDGFSGNAEKCTSVGSGLHRAVIGEPNVFTVNCSDAGRGSLMVGVEGPAIPAKEIKIKHTGGKVYAVNYTLEEPGEYVLKVLWGEKHIPGSPFHVTV

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00630 all species →	Filamin	Filamin/ABP280 repeat	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017868 all species →	Repeat	Filamin/ABP280 repeat-like	Interproscan
IPR014756 all species →	Homologous_superfamily	Immunoglobulin E-set	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR001298 all species →	Repeat	Filamin/ABP280 repeat	Interproscan
IPR044801 all species →	Family	Filamin family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR38537 all species →	JITTERBUG, ISOFORM N	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0030036 all species →	Biological Process	actin cytoskeleton organization	Interproscan
GO:0051015 all species →	Molecular Function	actin filament binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K04437	FLNA; filamin-A	-	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.