Detailed information of Csp0G338480 in Chrysogorgia sp. JL179-B06

Genomic Location: Contig00639:725219...765975
NR annotation: no NCBI-NR hit recorded
Species Chrysogorgia sp. JL179-B06 · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13893
all species →
RRM_5RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)DomainInterproscan
PF00076
all species →
RRM_1RNA recognition motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035979
all species →
Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR012677
all species →
Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR000504
all species →
DomainRNA recognition motif domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15592
all species →
MATRIN 3/NUCLEAR PROTEIN 220-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003729
all species →
Molecular FunctionmRNA bindingInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0043484
all species →
Biological Processregulation of RNA splicingInterproscan
GO:0003676
all species →
Molecular Functionnucleic acid bindingInterproscan
GO:0003723
all species →
Molecular FunctionRNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for Csp0G338480.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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