Gene detail

Detailed information of Csp0G343330 in Chrysogorgia sp. JL179-B06

Genomic Location: Contig00644:973452...974205
NR annotation: no NCBI-NR hit recorded
Species Chrysogorgia sp. JL179-B06 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00227 all species →	Proteasome	Proteasome subunit	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR023333 all species →	Family	Proteasome B-type subunit	Interproscan
IPR033811 all species →	Family	Proteasome beta 3 subunit	Interproscan
IPR029055 all species →	Homologous_superfamily	Nucleophile aminohydrolases, N-terminal	Interproscan
IPR016050 all species →	Conserved_site	Proteasome beta-type subunit, conserved site	Interproscan
IPR001353 all species →	Family	Proteasome, subunit alpha/beta	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR32194 all species →	METALLOPROTEASE TLDD	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0019774 all species →	Cellular Component	proteasome core complex, beta-subunit complex	Interproscan
GO:0043161 all species →	Biological Process	proteasome-mediated ubiquitin-dependent protein catabolic process	Interproscan
GO:0005839 all species →	Cellular Component	proteasome core complex	Interproscan
GO:0051603 all species →	Biological Process	proteolysis involved in protein catabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02735	PSMB3; 20S proteasome subunit beta 3	EC:3.4.25.1	Proteasome	ko03051	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.