Gene detail

Detailed information of Csp0G355980 in Chrysogorgia sp. JL179-B06

Genomic Location: Contig00658:649115...686121
NR annotation: no NCBI-NR hit recorded
Species Chrysogorgia sp. JL179-B06 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Csp0G355980

ATGGACCCAATAAAAATGCCAGAGGAATGGCTTAAGTTTATTACAAAAGAAAGTAGATCGTACGATGGACCGAGTAGGTACAAGTTTTGTATGCAGCTGTATCGACGGGCCATCAAAGCAATACCTGTAGATGAATATGGACATAACAACAATGCATATGCCAAGATTTTGATAGATTTTGCAAAGCTACACGCGAAGACTTCTGAATATGAGGCGAGAAATGTCTTTCAAACAGCAAGAAACAATGTGAAACATTGCTCCCTTGTCTATGTTGCTTGGGCACAGTTTGAACTGTTACACAATAATCCATCGAAATGCAAAAAGCTGTTGAACAAAGGAAAGCAGTCTTGCGCTGAGCCCGCTGGCCTGTTGGACAGGGCCTTGGAGAATCTGGCCAGCGGCAACACCCAACTCGTCGACGAAGAAACGGAGGAGTACACGTTCACGGAGTTGATCAATAGAGGCTCGAGCACATCAGAAGATGATACCGCTGGCCGACTTTCTGGAAAACACACGGCGCGACGCTCTGATTGCGATCACGATGCCAAGACCAGCCCAAAAATAGAAGGACCACATCGTAATTCTCTGCATGAAAATCGCGCCTCCTGTGAGTCCGACTCAGCTACATTTTCCTTGCCCGTAATTCGGAGGAAACATGTTGGATACTCCGAGAGCAGCGAAGAAGTCGATAGCCTGTCGTCATTGTTTAACAGGAATAAGGTTCCCGTTGGTAATCAACAGAACCAAGCAACATTTGTTACGCCACAGACAGTCAAGGCAACGCCTCAATCTGTATCGACATACAAATATCCCACTGGTGGTTCATCGCTAACAAATAACAAAACTCGCAGTCAGAAGCGGCTGGGCTTCATCGGCTTGCCGCGAAGAGTCGCTATCCCGAAAAAGGAAGAGACGGAAGATCTGGAGGAAGACGAGATTGATCCCGCAGAGGAGGAGAAAAAACCCGACATTGAAACGCCAAGAAATAAGGAAGGAGATTCCGTCGATGGCGTCTTTCCTTTCGCGGAAAGTGAGAAGAGAACGTTACCGAGTGTTACTGAAAACATTTTACTATTCAGCAGCAGCAGCAAACGAATACAAGAAAACCGTTCCAGCACGTGTGCAGCGGCTACACCACAACAGCATCCAACCCCTTCCCTCCCTGATGGCCAACCTCGGCAACCATGCTCTGTCTCTGCAGCTGCTACCTCGTATGAGAAAGTGCGCGCCGAACCATCTGGTACCAGCAGTCACAAGCATGAATATAAAACTCACGACACTAGTTCTCGTCCAGTGGACTTGGCCCGACACATTCCACATGCTACGCCGTTCTACGATGCTGGTGGTAGGCTCCCTAACGGCGCTATAGCCGCGCAACCAATGTCCGCTCCGTTTACGTCGAACAACGTTCTGGTCGTCAATGGCAAAGTGTATCATAAACTAATCACCATTGGAAGAGGAGGCTCTAGCAAGGTTTACAGTGCGTTTGACGGCGAGAAAACGTGGGCCATCAAGTACGTAAGTGTGGAAGATGCCGACCATGCTGTCATTCAAAGTTACGTCAATGAAATAACACTGCTAAAGAGACTTCAAGGCCATGAAAGTATTGTGAAATTATATGATTGGGAAATGGACGAAGTTGGTAAAGTGATCAAACTAGTTTTGGAAATTGGCAGCATCGATTTAGCTGGGTACCTGCGGAAGAACCCGGAGAAAATAACACGAGATTTCATCAAGGTCTGTTGGAAACAAATACTCGACGCAGTCCAAGTCGTGCACGACAATGGCATAGTTCATAGTGACCTGAAGCCTGCGAACTTCTTGCTCGTCGAGGGAAACCTGAAGCTAATTGATTTTGGAATCGCCAATGCCATTCAGGCCGACATGACCAGTTTCATGCGAGATTCACAAATTGGAACACTGAATTACATGTCACCGGAAGCATTGAAGGACGTAAAGATTGGTCGAGCTAGTGACGTGTGGGCCTTGGGCTGCATATTGTACTTAATGGTGTACGGTAAAACGCCGTTTCAACACATTTCAAATCACATGCAGAAATGGCAGAGCATTATGGATCCAACCTACGAGATAAAATATCCAAGAATCGAAAACCAAGATCTTGTTGATACAATGAAGGGTTGTCTAAAGAGGAATCCTAAAGAACGCTATACCATATCCCAACTGCAAAACCATCCATTTCTCACTGGAAAAACAAAAGCTAACGATGTGGAAACCGTTCTTAACTGTCTCAGGCAGATGAAGGAAATCAACTCTCCTACGACCCTTAGGACATTGACACGAAATATGTTACAGGAATTATCGTGCGGTCGTTCGTTGGACATGGCCTCAATACAGCCCTTACACATATCTTCACAGCCTTGTAGACAACCTTTGTGCCAGAATATATCAAGCAGTGTTCCGCAGCAGAAGAAAAACTACCAGTACTTTGCAGGTGGTCATGAAGGTGACAAGGAAAATGCAGGAACAAAAGCCTCGAGGTAG

Transcript

Csp0G355980

Protein

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003483 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR027084 all species →	Domain	Protein kinase Mps1 family, catalytic domain	Interproscan
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22974 all species →	MIXED LINEAGE PROTEIN KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0000776 all species →	Cellular Component	kinetochore	Interproscan
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0004712 all species →	Molecular Function	protein serine/threonine/tyrosine kinase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0007059 all species →	Biological Process	chromosome segregation	Interproscan
GO:0007094 all species →	Biological Process	mitotic spindle assembly checkpoint signaling	Interproscan
GO:0018105 all species →	Biological Process	peptidyl-serine phosphorylation	Interproscan
GO:0033316 all species →	Biological Process	meiotic spindle assembly checkpoint signaling	Interproscan
GO:0034501 all species →	Biological Process	protein localization to kinetochore	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K08866	TTK, MPS1; serine/threonine-protein kinase TTK/MPS1	EC:2.7.12.1	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.