Detailed information of Csp0G378650 in Chrysogorgia sp. JL179-B06

Genomic Location: Contig00711:523453...543603
NR annotation: no NCBI-NR hit recorded
Species Chrysogorgia sp. JL179-B06 · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Transcription factor familyMYB · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13921
all species →
Myb_DNA-bind_6Myb-like DNA-binding domainDomainInterproscan
PF00249
all species →
Myb_DNA-bindingMyb-like DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009057
all species →
Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR001005
all species →
DomainSANT/Myb domainInterproscan
IPR051651
all species →
FamilyDMTF1 DNA-binding transcriptional regulatorsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46380
all species →
CYCLIN-D-BINDING MYB-LIKE TRANSCRIPTION FACTOR 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000976
all species →
Molecular Functiontranscription cis-regulatory region bindingInterproscan
GO:0000978
all species →
Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981
all species →
Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0003700
all species →
Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0006355
all species →
Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0006357
all species →
Biological Processregulation of transcription by RNA polymerase IIInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for Csp0G378650.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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