Gene detail

Detailed information of Csp0G381850 in Chrysogorgia sp. JL179-B06

Genomic Location: Contig00714:4435459...4462791
NR annotation: no NCBI-NR hit recorded
Species Chrysogorgia sp. JL179-B06 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Gene family

Family type	Membership / link
Transcription factor family	Homeobox · all TF in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00046 all species →	Homeodomain	Homeodomain	Domain	Interproscan
PF03798 all species →	TRAM_LAG1_CLN8	TLC domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006634 all species →	Domain	TRAM/LAG1/CLN8 homology domain	Interproscan
IPR001356 all species →	Domain	Homeobox domain	Interproscan
IPR016439 all species →	Family	Sphingosine N-acyltransferase Lag1/Lac1-like	Interproscan
IPR009057 all species →	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12560 all species →	LONGEVITY ASSURANCE FACTOR 1 LAG1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0046513 all species →	Biological Process	ceramide biosynthetic process	Interproscan
GO:0050291 all species →	Molecular Function	sphingosine N-acyltransferase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23727	CERS5_6, LASS5_6; sphingoid base N-palmitoyltransferase	EC:2.3.1.291	Sphingolipid signaling pathway	ko04071	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.