Gene detail

Detailed information of Csp0G407740 in Chrysogorgia sp. JL179-B06

Genomic Location: Contig00758:104873...107390
NR annotation: no NCBI-NR hit recorded
Species Chrysogorgia sp. JL179-B06 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00005 all species →	ABC_tran	ABC transporter	Domain	Interproscan
PF02361 all species →	CbiQ	Cobalt transport protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015856 all species →	Domain	ABC transporter, CbiO/EcfA subunit	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR003439 all species →	Domain	ABC transporter-like, ATP-binding domain	Interproscan
IPR017871 all species →	Conserved_site	ABC transporter-like, conserved site	Interproscan
IPR003339 all species →	Family	ABC/ECF transporter, transmembrane component	Interproscan
IPR050095 all species →	Family	Energy-coupling factor transporter ATP-binding	Interproscan
IPR003593 all species →	Domain	AAA+ ATPase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43553 all species →	HEAVY METAL TRANSPORTER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0042626 all species →	Molecular Function	ATPase-coupled transmembrane transporter activity	Interproscan
GO:0043190 all species →	Cellular Component	ATP-binding cassette (ABC) transporter complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for Csp0G407740.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.