Detailed information of Csp0G407960 in Chrysogorgia sp. JL179-B06

Genomic Location: Contig00758:168263...169312
NR annotation: no NCBI-NR hit recorded
Species Chrysogorgia sp. JL179-B06 · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0014477 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13932
all species →		GIDA_CtRNA modifying enzyme MnmG/GidA C-terminal helical bundleDomainInterproscan
PF01134
all species →		GIDAGlucose inhibited division protein AFamilyInterproscan
PF21680
all species →		GIDA_C_1sttRNA modifying enzyme MnmG/GidA C-terminal helical domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002218
all species →		FamilytRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-relatedInterproscan
IPR047001
all species →		DomaintRNA uridine 5-carboxymethylaminomethyl modification enzyme, C-terminal subdomainInterproscan
IPR020595
all species →		Conserved_siteMnmG-related, conserved siteInterproscan
IPR044920
all species →		Homologous_superfamilytRNA uridine 5-carboxymethylaminomethyl modification enzyme, C-terminal subdomain superfamilyInterproscan
IPR026904
all species →		DomaintRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG, C-terminalInterproscan
IPR036188
all species →		Homologous_superfamilyFAD/NAD(P)-binding domain superfamilyInterproscan
IPR040131
all species →		DomainMnmG, N-terminal domainInterproscan
IPR049312
all species →		DomaintRNA uridine 5-carboxymethylaminomethyl modification enzyme, C-terminal, N-terninal subdomainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11806
all species →		GLUCOSE INHIBITED DIVISION PROTEIN AInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0002098
all species →		Biological ProcesstRNA wobble uridine modificationInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0008033
all species →		Biological ProcesstRNA processingInterproscan
GO:0030488
all species →		Biological ProcesstRNA methylationInterproscan
GO:0050660
all species →		Molecular Functionflavin adenine dinucleotide bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for Csp0G407960.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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