Gene detail

Detailed information of Csp0G413160 in Chrysogorgia sp. JL179-B06

Genomic Location: Contig00768:1460066...1475797
NR annotation: no NCBI-NR hit recorded
Species Chrysogorgia sp. JL179-B06 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Csp0G413160

ATGGCGACGTATTTGGAGATTTTTGGTTCGACAGATCACGTGGCAACGATTGTTTTTAGCAATGAAGAGTTCTACGGCATCTTGGGCGTGAGTAGAACTGCAAATAATGATGAAATCAGGAGAGCTTACAAAGGATTAGCGCGAGAATGGCATCCTGATAAAAACACAGATTCTGATGCTCAGGAAAAATTTATTAAAATTAATGAAGCATATAAGACGCTGTCTGATCCAAAGAAAAGGGAGGATTACGATAGATATGGACACTCGGGAGCACCTAACCAATGGCAAAAAGACAATCAGTTTTTCCAAGACAGTGGATTCGTGTACTTCAATGGAATGCCTTTTCAATTTCAAAGCAACTGGAGACACAGAGACTTTACAACTCTAAATTATTTTCAGAGAACTATTTTACCAGAAAGCCATAGAAAGCCATATCTACTACAGATTGTTTCAGACTGGTGTGTAGATTGTGCAGCTGTCGAAGAAATCTGGGAACATACCTCTCGAGAACTGAAATCTCTTGGTTTGGGGACAGGTCGTGTGAACAAAAATATTGACCCTCAATTAGCGAAGCAGTTGGGCGCTCGGAAATTGCCAGATTTTGTCGGAGTTATTAGTGGAAAGTTGTACCATTATAGCGGCACAGTTTCAGTTGGGAAGCTTAAAGAGTTTGTCAGTGAACTTTTTCCAAATAATTTTGTTCCTGAGATTACCAACTCCTCTCTTGACTCATTCCTTCATCATTGGCATGACAACAAACCTCGGGCACTGCTTTTCACCACCAAGACCGAACCACCATTGTTACTCAAAGTAGTGTCATTTAAATACCAAGATAACGTTGGTATTGGATATGTCCAGCTTGATAATCCATCCAACGTTGAAATGGGGGAAAGGTTCAGAGCGGATAAATTTGGACCAACTTTCGCTATTTTTAAAGAAAATACTTTTCAACCTGATGTTCTTCTCAAGGGCTCAGAACTAAAGAGCGGGACATTAGATGAAGTTATTTCGAAAAATTTATACCTGAATTTTCCAAGGTTATCGTCGCAGTCGATGTTTGAAACGTTTTGTCCACAAGAAAGGTTTCTGTCTCAAAGAAGTTTATGTGTTATACTGTTCATCAACAACAGCCCTCATCTCTTACGCGAACACCCACTGCTTAGTATGTCGAAAAATCCAACATGGTTGGCCAAGAAAGTACGATTTGCTTACGTCAACCAGGCGGCCCAACAGCCTTTTGAAAGTTCCATTAAGATGACAGAGAACACGAGAACTATTTGCAAGGACAAAAAAACGTCAAAAAAGGTGGTTATACTGTGGCATGTAAAGAAAAGCGAAGTGAAGTACAGTTGGTTGGTTGGAGGTTGGTGCGGACATAAAGATGTGTCACGACTTACGGCAATGTTAAACCAGATACAGTCTGGAAAAGCTAAACTCGACTTGAGTGCTGTCGTTGCAGAACTCAATAACGAAAATAAAAAAGGTTATCTTTCGCGGCTTTTTGATGTTTGGAATGATATTGTGTATTATTTGTTCCATTATTTTAACTGGTCTGATAACTTGTCCACTCTGTCGTTGGCCATCACCTTTGTGGCTGTTTTCTTCATGAGTTACCTGCTCCCTTCGGGAAGTGAGAAGGATTCTAATTTGAACCCTAATCAAGACCATCCGCCTCCTGGGACAAGCGATGTTTTTGGATTGATTCAGCTCAACTCTCAAAATCAAGATGAGTTTCTCCACAAGGCAAAACAAGGTCAATTATTTATCGTGTTACTCTCTGACGCGACGTCCAATTCACAAGCCGTCCGCTCACCAATCGTTCAAATTTTCGCCGATATATCTCGACTGTATCTAAGAGAGAATATTTATAGTTTTGGCTGGTTATCCCTTCGAGATCACATCGCGTGGTGTAACGAAGTGATGAAGGTTCAAACATTTGGTGAAATAAAACCTGGCACAGTGCTCGCATTACATGGACCAAAGAAATACCTCTCAATATTTAAAGTTCATAAAAGGAGCGAATCAGAGCAAGATGATGGAAACTTCTTCGAGGATTCCGTCGACGAAGACGGCGAGGTCGCCTCGATGGTTTTCCAAGAAGACAAGAGAACTGAAAGACGAGTTGCAGAAGCTTTGGGACGAGAGTTGCCGAGGTGGCTTGAGAGGCTTTACGAAGGCATGTTGCCACGCGTGAAGCTAGAGCAATGGCCCAGAATGGAATGTGATAATTAA

Transcript

Csp0G413160

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00085 all species →	Thioredoxin	Thioredoxin	Domain	Interproscan
PF00226 all species →	DnaJ	DnaJ domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013766 all species →	Domain	Thioredoxin domain	Interproscan
IPR001623 all species →	Domain	DnaJ domain	Interproscan
IPR036869 all species →	Homologous_superfamily	Chaperone J-domain superfamily	Interproscan
IPR052448 all species →	Family	DnaJ Homolog Subfamily C Member 16	Interproscan
IPR036249 all species →	Homologous_superfamily	Thioredoxin-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44303 all species →	DNAJ HOMOLOG SUBFAMILY C MEMBER 16	Interproscan

Gene Ontology

No Gene Ontology signature was detected for Csp0G413160. This gene does have a gene model — the search simply returned no hit.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K09536	DNAJC16; DnaJ homolog subfamily C member 16	-	Chaperones and folding catalysts	ko03110	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.