Detailed information of Csp0G415220 in Chrysogorgia sp. JL179-B06

Genomic Location: Contig00769:942506...967483
NR annotation: no NCBI-NR hit recorded
Species Chrysogorgia sp. JL179-B06 · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007218 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04157
all species →		EAP30EAP30/Vps36 familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036390
all species →		Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR040608
all species →		FamilySnf8/Vps36 familyInterproscan
IPR016689
all species →		FamilyESCRT-2 complex, Snf8Interproscan
IPR036388
all species →		Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12806
all species →		EAP30 SUBUNIT OF ELL COMPLEXInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000814
all species →		Cellular ComponentESCRT II complexInterproscan
GO:0071985
all species →		Biological Processmultivesicular body sorting pathwayInterproscan
GO:0043328
all species →		Biological Processprotein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathwayInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K12188SNF8, EAP30; ESCRT-II complex subunit VPS22-Exosomeko04147deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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