Gene detail

Detailed information of Csp0G435100 in Chrysogorgia sp. JL179-B06

Genomic Location: Contig00795:4201553...4230049
NR annotation: no NCBI-NR hit recorded
Species abbreviation CSP1 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Gene family

Family type	Membership / link
Transcription factor family	P53 · all TF in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00870 all species →	P53	P53 DNA-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011615 all species →	Domain	p53, DNA-binding domain	Interproscan
IPR002117 all species →	Family	p53 tumour suppressor family	Interproscan
IPR008967 all species →	Homologous_superfamily	p53-like transcription factor, DNA-binding domain superfamily	Interproscan
IPR012346 all species →	Homologous_superfamily	p53/RUNT-type transcription factor, DNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11447 all species →	CELLULAR TUMOR ANTIGEN P53	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000976 all species →	Molecular Function	transcription cis-regulatory region binding	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0003700 all species →	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0006915 all species →	Biological Process	apoptotic process	Interproscan
GO:0000978 all species →	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981 all species →	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for Csp0G435100.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.